Gene BBta_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3239 
Symbol 
ID5153333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3393642 
End bp3394124 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID640558105 
Producttranscriptional regulatory protein 
Protein accessionYP_001239252 
Protein GI148254667 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.616739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG ACTCCAGGAA TCGGTGGAAA TCGGGACCAC CCCGGACGCG AGACCAGCTG 
CAGAGCTACA TTCCCTATCT CCTCAACCGG CTCGCCAATC GCTGGAACCT CGATCAGAAC
CGTGATCTCA GCGAGCACGG CATCAACAAC GTCGTATTCC GAACCTTGTC GGTGCTGTTC
ATCTACAAGA CCCTCACCGT CAATGAGGTC GCCGTTCTCG CCGTGACCGA ACAGTCGACC
GCGAGCCGCA TGGTCGAATC CATGGTGACG TCGGGCCTCG TGAAGCGGGA GATTGCCGAG
GAGGATCAGC GCCGGCGGGT CGTGGGCCTC ACTCCGGACG GCGAAGCCTT GCTGCGAAAG
GTCTGGCCGA TCATGGAACG AAACTATGAT CGGCTGACCG CGGGCATCGA CCCCGACGAG
ATCGAGATCT GCGCGCGCGT GCTCGCCAAG ATGGTCACCA ACATCCGGCA GAACGACATC
TGA
 
Protein sequence
MAKDSRNRWK SGPPRTRDQL QSYIPYLLNR LANRWNLDQN RDLSEHGINN VVFRTLSVLF 
IYKTLTVNEV AVLAVTEQST ASRMVESMVT SGLVKREIAE EDQRRRVVGL TPDGEALLRK
VWPIMERNYD RLTAGIDPDE IEICARVLAK MVTNIRQNDI