Gene BBta_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3238 
Symbol 
ID5153332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3392960 
End bp3393631 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID640558104 
Productputative 3-oxoacyl-(acyl-carrier-protein) reductase (3-ketoacyl- acyl carrier protein reductase) 
Protein accessionYP_001239251 
Protein GI148254666 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.330191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAAGA GGCTCGTCGC GAGGGGGCAG CGCGTGGTCT CGGTCGGCCT GGACAAGCCG 
GACTGGACGC ATGACTTGCT CGCGGCCTAT CGCGCCGACC TGACCAGCAT CGACGCCACG
CGCGCGATCG CGCAGGAGAT CTGTCAGGCC CATGCCGTTG ATTGTCTCGT GCACAATGCC
GGCGTGATCC TTCCCAATCT TCTGCCCGAT GCCAAGCCGG AAGATATTCT GACGCTTGCG
CAGTTGCATC TGGGAGCGCC GATGCTTCTG ACACAGGCGG CGCTGGACGG AATGCGCGCG
CGTCGGTTCG GACGAATTGT CTTCGTGAGC TCGCGGGCGG CGATGGGCGC GGTGACGCGC
TCGGCCTATT CCGCGACCAA GGCCGGAGTG CATGGGATGG CGCGGACCTG GGCGCTCGAA
CTCGCGTCCG GGGGCATTAC GGTGAACGTC GTCGCCCCAG GCCCGATCCT GACGGATAAT
TTCTGGGGCG TCATTCCCAA GGGATCGGAG CAGCAGGAGC GGATGGCGCG CAACATCCCC
GTGGGACGGC TCGGCGCGCG CGAGGACGTG GCCCATGCCA TCGAATTCTT CCTCGACGAG
CGTTCCGACT TCGTGACCGG ACAAGTGCTG TATGTCTGCG GCGGCGCCAG CCTGGTCGGC
CTCGGTCCCT GA
 
Protein sequence
MAKRLVARGQ RVVSVGLDKP DWTHDLLAAY RADLTSIDAT RAIAQEICQA HAVDCLVHNA 
GVILPNLLPD AKPEDILTLA QLHLGAPMLL TQAALDGMRA RRFGRIVFVS SRAAMGAVTR
SAYSATKAGV HGMARTWALE LASGGITVNV VAPGPILTDN FWGVIPKGSE QQERMARNIP
VGRLGAREDV AHAIEFFLDE RSDFVTGQVL YVCGGASLVG LGP