| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3234 |
|---|
| Symbol | |
|---|
| ID | 5153469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3388479 |
|---|
| End bp | 3389429 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640558100 |
|---|
| Product | vanillate O-demethylase oxidoreductase |
|---|
| Protein accession | YP_001239247 |
|---|
| Protein GI | 148254662 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.432272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGC ATCCGCTGAC GCTCAAGGTG CTGTCGATCG CTGCGGAGAC ACCGCACGTT
CGGAGCCTTG TGTTCGGCGT GGAGGGCGGA GCCGTCCCGG ACTGGCAGGC CGGGGCACAT
ATTCGCGTCG CCCTCCCGAA CGGCGGAGAC CGGCCGTATT CTCTGCTGGC CCTGCCGGAA
TTGCCGGCTG GCGCGCTGGC GCTCGGCGTG TTGCGCGAGG CCGCGTCGAC CGGCGGCTCG
CACTACATGC ACGCGTTGAG AGCGGGCGAT GTCGTGAAGG CGTCCGCGCC GGTCAACAAC
TTTCCTTTGC ATGCTGGCGC CGCGCCGGCG CTGCTGTTCG CTGGCGGTAT TGGCATCACT
CCCATTCTCT CGATGGCTGC CGAGTTGAGC GCGCGAGGAC ATCCGTTCCG GCTGCACTAT
GCGGGGCGGG CGCCGGGAGG GCTCGCTTTC TTGCCACAGC TGCAGGCGAT CTGTGGTCGC
AGCCTTTCGA TCCACTATGA CAGCGACGAG TCGCGCTTGG ACATCGCGGC CGCCCTGGCC
GCGGCTGCGC TCGGGTCTCA CGTCTATGTC TGCGGCCCGG CAGGCATGAT CGAGGCGGTG
AAGGCCGCGG CGCTGACGAA AGGCGTCCCG CCGGATCGCA TTCATTTCGA GCTGTTTCGG
GCGGAGACGC CCAGTTCGCC AGACCGGCCG TTCGAGGTCG AGCTGAGATC GACGGGGCAG
GTCGTCACGG TCGCGGCAGA TCAGACGATC ATTCAAGCGC TGGAGGCGGC CGGGCTCGAC
GTGCTCTATG ATTGCCAGCG CGGCGATTGT GGCATCTGCC AGTGCGGCGT GATCGCGGGC
GTTCCTGATC ATCGCGACGT CATTCTCAGC GATGAGGAGA AGCGCTCCAA CAAGTTGATG
CAGATCTGTG TGTCGCGCGC GAAATCAGAC CGGCTGGTGT TGGATCTTTG A
|
|---|
| Protein sequence | METHPLTLKV LSIAAETPHV RSLVFGVEGG AVPDWQAGAH IRVALPNGGD RPYSLLALPE
LPAGALALGV LREAASTGGS HYMHALRAGD VVKASAPVNN FPLHAGAAPA LLFAGGIGIT
PILSMAAELS ARGHPFRLHY AGRAPGGLAF LPQLQAICGR SLSIHYDSDE SRLDIAAALA
AAALGSHVYV CGPAGMIEAV KAAALTKGVP PDRIHFELFR AETPSSPDRP FEVELRSTGQ
VVTVAADQTI IQALEAAGLD VLYDCQRGDC GICQCGVIAG VPDHRDVILS DEEKRSNKLM
QICVSRAKSD RLVLDL
|
|---|
| |