Gene BBta_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3217 
Symbol 
ID5152572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3369725 
End bp3370573 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID640558083 
Producthypothetical protein 
Protein accessionYP_001239230 
Protein GI148254645 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCGT CGGCCCCGGC CCTTGCCGTC GACCGCGACA TGGTCATCGA CACTGCCGAT 
GGCCCGCGTC ATGCGCTGGT GATACCGGCC CCCAGCGGGC CGCGCCCCAC CGTGATCGTG
CTGCATGGCG CGCTCGGCTC CGGGGCCGGC ACCGCGCGCA CGGCCGGCTT TGCCGAAGCC
GCCGCGCGCC GGAACTTTAC CGCCGTGTTT CCTGATGGCC TGGATCGGCA GTGGAATGAC
GGCCGCATGG ATGGGCACAA CGGGCCCGAT GATATCGGCT TCATCCGCGC GCTGGTTCGC
CGTCTCGTGG CGGACGGCGT CGCCGATCCC CACCGCGTGT ATCTGGCCGG CATCTCCAAT
GGCGGCATGA TGAGCTTCGC GCTGGCCTGC AAGGCGCCGG AGCTGTTCGC CGGCATCGGC
ACGATCATCG CCAACATGCC GGCCGGCGTC GAACCCTGCA CCGCCAGGCC GATGCCGGTG
GTGATGATCA ACGGCACGGC GGATCCGATG GTGCCCTATC GCGGCGGCGA GGTCGGCCTG
CGCGGCGGCC GCGGCCTGGT GTGGAGCGCG GAGACGACGG CGGCGTTCTT CGCCCGGCGC
GACGGCTGCG ACGCCCAGCG CATGGTCGCG TTGCCGCATC GCGATGATAC GAACGGCACG
TCGGTCACGC AGATCAGCTG GCAAAACTGC AAGGTGACCG GCGGCGTATC GCTCTATCGC
GTCGAAGGCG GCGGTCATGC CCTGCCCGGC CGACGCGCGC TGGCGCCACG CCTGCTCGGC
CCCAGCAATT TCGACATCGA CAGTGCAGAG ACCATTCTGA CGGCATTCGA TCGCGACGGA
GCCTTGTAA
 
Protein sequence
MLASAPALAV DRDMVIDTAD GPRHALVIPA PSGPRPTVIV LHGALGSGAG TARTAGFAEA 
AARRNFTAVF PDGLDRQWND GRMDGHNGPD DIGFIRALVR RLVADGVADP HRVYLAGISN
GGMMSFALAC KAPELFAGIG TIIANMPAGV EPCTARPMPV VMINGTADPM VPYRGGEVGL
RGGRGLVWSA ETTAAFFARR DGCDAQRMVA LPHRDDTNGT SVTQISWQNC KVTGGVSLYR
VEGGGHALPG RRALAPRLLG PSNFDIDSAE TILTAFDRDG AL