Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3214 |
Symbol | |
ID | 5152554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3366996 |
End bp | 3369071 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640558081 |
Product | hypothetical protein |
Protein accession | YP_001239228 |
Protein GI | 148254643 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTAT CCCCGCCCCA TGATGAGCAG ATGCGGCCGG AGCGCGTGAT CACGCGGCTG GTCGATCGCG TGTTCGGCTA CGACTTCTTC CTGTCATACA GCCGGTCCGA CGGAATGCAT CTGCCGCAGC GGCTGAAGGA GCGGCTCGAG CATGCCGGCT TCCGCGTCTT TCTCGACCAG ACCGAATATG TGGCCGGCGC CGATCTCAGA CGCGAGACCC GGCGGCAAGT GCTCAAGAGC CGCAAGATCG TCGTGATCGG GCGTCCCGGT GCCTTCAGGT CGGAATGGGT CAGGCGCGAG GTTGCGGTGG CACTGGCGAG CGATGTCGGC CCGGTGATCC TCGATCTCAA CGGCGCGCTG GCGACTGCGC CCGCGGACGC GCCGCTGGCC GCGATGGTGC GTGAGCGCGA CTGGCTGAGC CTGCCGGAAA CATTGCCGGA TGCGGACGGC GAGCCGAGCG ATCACATCGT CGCTGAGCTG GTGCGCAGCT TCAACCACAC GCGCCAGGAG ACGCGCCGGC AGCGCGTGTT CCTGACGGCC GCGCTTGTCC TGTTCGTGAT GGCCGCGGTC GCGAGCTGGC AGGCGTGGCA GGCCATTCAG GCCCGGGACA TCGCCGAAGC CGAGCAGCGC CGTGCCGAGC GCGCGCTGGA TCAGGTCCAG AGCACGGCCA ATCGAAGCGT CCAGGCGCTG GCGCTGCGGA TCCGGACAAC GCGCGAGACC TCGGCGGCCA CGCCGCAGAT CCAGCCCTGC ACGCTCGCCA ATCTGCCGGC CTATGACGCG CTCGCCGCGA CTGCCCTGAA GGTTGGCGAG GGCGAGGCGG CGCTGAAGCT GCTGGGGAAT TGTCTCAGCA TGGCCGAAGC GAACATCACC ACGGCCGCCG ATGGCGCGGC GTGGCAGACA GGCGCGGCGA TGCTGCACCA GCGGATCGGG GAGCTCTCGG ATGCCGCGGA CAAAGAGCGT CATTTTCGCG CGTCCTTGAC GCTGTGGCGC GGGCTGGCCG ATCGGTCGGC GCCCGCGCGC GAGCCGTTGG CCGCGGCGCT GAACCGGCTC GGAGATGTTC AGCTGACGAG CCGACGTGCC GACGCGGCGC TCCCGCTCTA TCGCGAAGCG CTGTCGCATC TCGAGGCGCT CGCCGACTCG CAACCGGCGC GGGGCGAGCG GCGGCAACTG GTGTCAGCGA CCTATCAGCG CATCGCCGAT GCGCTGCTGC AGCTCGGCAA TCCCGGCGAA GCCCTGGGCT GGGCCGACAA GGATCTGCAG ACCTATGGCG ATCTCGCCGG GATTGAGCAG ACGGCCCCGG ACCGGCAACG CGACGTCGCG TCCAGCCTCG ACCGGCGGGC CCAGGCGCTC GATCTGCTGG GGCGGCACGA CGAGGCGCTG GCCGTGTTCC AACGCGGCGT CGCTCTGCTC GACCGGGCCA TGGCCGCCGC AGGCGCCGAG CCGAGCTGGC AGCGCGATGC CGCGGCGATG CGCGAGATGA TGGGCAAACT GCTGGGGCGG ATGGGCGAAT CGGATCGCGC CATCGACCAG TTCTGGCAGG CGCTGCAGCT TCGCGAGCGG CTCGCGACCT CGCAGGAGGA TCCGGGCTGG CTGAGCGAGC TGACAGAAGC CTATCGGCGC TCGAGCGAGC TGATGCTGCA CATCGACCGG GTCGCGGAGG CGCGTGAAAT GGCCGAGCAA TATCTGCTCG CGGCCAGCAT CAATGCCGAT GCGACCAGGG ACAAGCTCTC GCGGATGCGG CGGGCATTGG GAACAGTGTG CTGGACGGCG GTCAATGACG GACAGTTCGG ACGCGCGCTC TGGGTCGGAC AGCGCGCCGT CGAGCTGTCG CCGCAACGCG ACTGGGTCAG CCTGAACTAT GCCCACGCTT TGATGCTGTC GGGCCAGCCG GATGCGGCAC GGACGATCTA CCGGGAGCTT GATGCAGCAC CGGGTGATGC CGGCGGTCTG CGACGGCAGA TGCGCGACGA TTTCGCCGTG CTGCGCCGAC GCGGCCATGG CCATCCGCTG ATGGCCGAGA TCGAAGCCAC GATGAGGTCG GTCAACGCCG CCCCGAATCA ATTGCAGCAG CCATGA
|
Protein sequence | MTVSPPHDEQ MRPERVITRL VDRVFGYDFF LSYSRSDGMH LPQRLKERLE HAGFRVFLDQ TEYVAGADLR RETRRQVLKS RKIVVIGRPG AFRSEWVRRE VAVALASDVG PVILDLNGAL ATAPADAPLA AMVRERDWLS LPETLPDADG EPSDHIVAEL VRSFNHTRQE TRRQRVFLTA ALVLFVMAAV ASWQAWQAIQ ARDIAEAEQR RAERALDQVQ STANRSVQAL ALRIRTTRET SAATPQIQPC TLANLPAYDA LAATALKVGE GEAALKLLGN CLSMAEANIT TAADGAAWQT GAAMLHQRIG ELSDAADKER HFRASLTLWR GLADRSAPAR EPLAAALNRL GDVQLTSRRA DAALPLYREA LSHLEALADS QPARGERRQL VSATYQRIAD ALLQLGNPGE ALGWADKDLQ TYGDLAGIEQ TAPDRQRDVA SSLDRRAQAL DLLGRHDEAL AVFQRGVALL DRAMAAAGAE PSWQRDAAAM REMMGKLLGR MGESDRAIDQ FWQALQLRER LATSQEDPGW LSELTEAYRR SSELMLHIDR VAEAREMAEQ YLLAASINAD ATRDKLSRMR RALGTVCWTA VNDGQFGRAL WVGQRAVELS PQRDWVSLNY AHALMLSGQP DAARTIYREL DAAPGDAGGL RRQMRDDFAV LRRRGHGHPL MAEIEATMRS VNAAPNQLQQ P
|
| |