Gene BBta_3177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3177 
Symbol 
ID5150925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand- 
Start bp3326721 
End bp3327335 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID640558043 
Productputative NADH dehydrogenase/NAD(P)H nitroreductase 
Protein accessionYP_001239196 
Protein GI148254611 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.999951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.135022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGACC ACCTCCCGCC GACCGACCGC ACCACCGAGC ACCCGGCCCA CCGCCTGTTC 
GTCGACCGCT GGTCGCCGCG CGGCTTCACC GACGAGGCGC TGCCCGAGTC GGCGCTTCTC 
ACCTTCATCG AAGCGGCGCG CTGGGCGCCC TCCTCGTATA ATTCGCAGCC CTGGCGCTTC 
CTCTACGCGC TGCGCGGCTC GGCACAGTTC GACACCTTCC TGGCGCCGCT GATCGAGTTC 
AACCGCGGCT GGGCGCAGCA TGCCGCTGCC ATCGTCTACG TGCTGTCGAA GAAGACCTTC 
ATCCCGGCCG GCAAGACCGA GCCGGTGCCG GCCCGCACAC ATTCCTTCGA CGCCGGCGCC 
GCCTGGGCCA ATTTCGCCAA CCAGGCCGCC CTGTCCGGCT GGGCCACCCA CGGCATGAGC 
GGCTTCGATG TCGCTGCCGC GCAGGCGGCG CTCGGCGTGC CCGATGATTT CGCGGTGGAG 
ATCGCGATCG CCGTGGGCCG CAAGGGCGAC GGCGAGAAGC TACCGGCGAT GCTGAAGGAG 
CGTGAGAAGC CAAGCCCGCG GCTTTCGATC GCCGAGATCG CCGCGTCAGG CCTATTCCCG 
AAGAGCTTCG GCTGA
 
Protein sequence
MTDHLPPTDR TTEHPAHRLF VDRWSPRGFT DEALPESALL TFIEAARWAP SSYNSQPWRF 
LYALRGSAQF DTFLAPLIEF NRGWAQHAAA IVYVLSKKTF IPAGKTEPVP ARTHSFDAGA 
AWANFANQAA LSGWATHGMS GFDVAAAQAA LGVPDDFAVE IAIAVGRKGD GEKLPAMLKE 
REKPSPRLSI AEIAASGLFP KSFG