Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3171 |
Symbol | cyoB |
ID | 5150718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3321045 |
End bp | 3323045 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640558038 |
Product | cytochrome o ubiquinol oxidase, subunit I |
Protein accession | YP_001239191 |
Protein GI | 148254606 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.404396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0592526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCA AGCTCGATTG GTCGGCGATA CCGTTGGGCC AGCCCATTCC ACTCGTCGCC GCCGGTCTGG TGCTGGTTGC TATTCTGGGC GTCCTCATCT GGGTGTTTGC CAAGGGGTAT TTCCCCTATC TCTGGCGTGA ATGGATCACC AGCGTCGACC ATAAGCGGAT CGGGGTGATG TACATCCTGC TCGCTTTCGT CATGCTGCTG CGCGGCGGCA CTGACGCCAT CATGATGCGC ACGCAGCAGG CCGTCGCTTT CCATTCCAAC GGTTACCTGC CGCCGGAGCA TTACAACCAG ATCTTTTCCG CGCATGGCAC GATCATGATT TTCTTCGTGG CGATGCCGTT CGTGGTCGGG CTGATGAATC TCGTCGTGCC GCTGCAACTC GGTGTCCGCG ACGTTGCCTT TCCGACCCTG AACTCCGTGG GATTCTGGCT TACCGCGACC GGTGCGTTGC TGGTCAACGT CTCGCTCGTG GTCGGCGAGT TCGCCCGCAC CGGCTGGCTG CCGTTCCCGC CGCTGTCGGA GCTCACCTAT TCGCCTGGCG TCGGTGTCGA TTATTATATC TGGGCGCTCG AGATCTCCGG GGTAGGGACG CTCGTCAGCG GTATCAACCT CGTCACGACC GTGCTCAAGC TGCGTACTCG GGGCATGAGC TATCTGCGCA TGCCGATGTT CTGCTGGACC ACGCTGGCCG CCAATCTGCT GATCGTTGCG GCGTTTCCGA TCCTGACGGC GACGCTGACG ATGTTGATGC TCGATCGCTA TTTCGGCTTC CACTTCTTCA CCAACGAGGC CGGCGGCAAC ATGATGATGT TCATGAACCT GATCTGGGCC TGGGGCCATC CCGAGGTCTA CATTCTGGTG CTGCCGGCCT TCGGCATCTA CTCGGAAGTG GTTGCGACGT TCTCCAGTAA ATCGCTGTTC GGCTATCGAT CGATGGTGCT GGCGACGATG GCGATCTGCG TCGTCTCCTT CATGGTCTGG CTGCATCATT TCTTCACGAT GGGCGCGGGG CCGGACGTCA ACGCGATCTT CGGCATTGCC AGCATGATCA TCGCGGTGCC CACGGGGGTG AAGATCTACA ATTGGCTGTT CACGATGTAT GGCGGCCGGG TGCGGTTCAC GACGCCGATG CTGTGGTCGG TCGGCTTCAT GATCACGTTC ATGATCGGTG GATTGACCGG GGTGCTCGTC GCGGTGCCGC CGGCGGATTT CCTGTTGCAC AACAGTCTTT TCCTGGTGGC CCACTTCCAC AACGTGATCA TCGGCGGAGT CCTGTTCGGC GTCTTTGCCG GCGTCACCTA CTGGTTTCCG AAGGCGTTCG GCTTCCGTCT GTATGAAAGC TGGGGCAAGG CGGCTTTCTG GTTCACCCTG ATCGGCTTCT ACATGACCTT CATGCCGCTC TACGTCGTGG GGCTGCTCGG CATGACCCGG CGCATGCAGC ACTACGATGT CGCCGAATGG CGGCCCTGGC TGGCGGCGGC GACCTTCGGC ACGGCGTTGC TCGCGATCGG TGTCGTTCTT CAAATCCTCC AACTCGTGTT CAGCATCCGC GACCGGGAAC GTCTGCGCGA CACCACCGGC GACCCCTGGG ACGGCCGCTC GCTGGAATGG GCGACATCGT CGCCGCCGCC GGTGTTCAAT TTCGCGGTGC TGCCGAATGT CACCGGGCAG GACGCGTATT GGCGGATCAA GGAAAACGCC AAAAACCAGC AGCTCCAGAC CAGAGAAAGG GACTATGAGG ACATTGAGCT GCCGAGAAAT TCTCCCACCG GCTTTGTCTG CGCCTTCTTC GCCACGATCA TGGGCTTTGC GTTGATCTGG CACATCTGGT GGATGGTGGC GCTCGGTGCA ATAGGGGCCT TCGCGACGTT CGTCGTGTTC GCCTGGCGCG ATCACGAAGA GTATGTGATT CCAGCAGCAG AGGTCGCCCG GATTGACCGC GGCATCATTG AAGCGCGGCA GGGATTATCG TCCGCGGCGC ACGGCACGTG A
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Protein sequence | MLGKLDWSAI PLGQPIPLVA AGLVLVAILG VLIWVFAKGY FPYLWREWIT SVDHKRIGVM YILLAFVMLL RGGTDAIMMR TQQAVAFHSN GYLPPEHYNQ IFSAHGTIMI FFVAMPFVVG LMNLVVPLQL GVRDVAFPTL NSVGFWLTAT GALLVNVSLV VGEFARTGWL PFPPLSELTY SPGVGVDYYI WALEISGVGT LVSGINLVTT VLKLRTRGMS YLRMPMFCWT TLAANLLIVA AFPILTATLT MLMLDRYFGF HFFTNEAGGN MMMFMNLIWA WGHPEVYILV LPAFGIYSEV VATFSSKSLF GYRSMVLATM AICVVSFMVW LHHFFTMGAG PDVNAIFGIA SMIIAVPTGV KIYNWLFTMY GGRVRFTTPM LWSVGFMITF MIGGLTGVLV AVPPADFLLH NSLFLVAHFH NVIIGGVLFG VFAGVTYWFP KAFGFRLYES WGKAAFWFTL IGFYMTFMPL YVVGLLGMTR RMQHYDVAEW RPWLAAATFG TALLAIGVVL QILQLVFSIR DRERLRDTTG DPWDGRSLEW ATSSPPPVFN FAVLPNVTGQ DAYWRIKENA KNQQLQTRER DYEDIELPRN SPTGFVCAFF ATIMGFALIW HIWWMVALGA IGAFATFVVF AWRDHEEYVI PAAEVARIDR GIIEARQGLS SAAHGT
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