| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3158 |
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| Symbol | |
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| ID | 5149825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3308923 |
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| End bp | 3309624 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558026 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001239179 |
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| Protein GI | 148254594 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0148477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0636538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACG CGCTGGACGT CTGTGCCCCG ACTGATGGCG TGCCCCTGAA CGCGCCGGCG
TCGCCGGATG TCGCCGAGGT GCCGTGGAGC GAGTCGGCCA GCACCGTTCC GGATTGCTCG
CCCGGTCAGG TCGCGGTGTT CGACGAGGAC AAGGAACTGC TCGATCGTCT CGCCACGGGA
GACGAGACGG CGTTCCGCCT GCTGGTCGAG CGTCATATCG ACCGCGCCTA TGCCATTGCC
TTGCGGATCG TCGGCAACGC CGCCGATGCC GAGGATGTGG TGCAGGACAC GATGCTCAAG
GTCTGGACCC ATCGCGGACG TTGGCAGCAT GGGCGTGCCA AGTTCTCGAC CTGGCTCTAT
CGCGTGGTCA GCAACCGCTG CATCGACCTA CGGCGCAAGC CGCGGACCGA GAATGTCGAT
GTCGTTCCGG AGGTCGCGGA CGGCAAGCCC GACGCGGCGA GCGTGATCGA ACGAGCCGAG
ATGAGCGATC TGCTGGAGGC TGCGATGCGT CGGCTTCCGG AGCAGCAGCG CGTCGCGGTG
ATCCTGTCGT ATCACGAGAA CATGAGCAAT GGTGAGATCG CCGAGGTGAT GGACACCACG
GTGTCTGCGG TGGAGTCGCT GCTGAAGCGG GGTCGCCAGC AATTGCGTGA CATGCTGCGG
CGGCACGAGC GCGACATCTG CGGCGCTTTC ACCGATTGCT AA
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| Protein sequence | MNYALDVCAP TDGVPLNAPA SPDVAEVPWS ESASTVPDCS PGQVAVFDED KELLDRLATG
DETAFRLLVE RHIDRAYAIA LRIVGNAADA EDVVQDTMLK VWTHRGRWQH GRAKFSTWLY
RVVSNRCIDL RRKPRTENVD VVPEVADGKP DAASVIERAE MSDLLEAAMR RLPEQQRVAV
ILSYHENMSN GEIAEVMDTT VSAVESLLKR GRQQLRDMLR RHERDICGAF TDC
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