| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3146 |
|---|
| Symbol | cobH |
|---|
| ID | 5150272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3297434 |
|---|
| End bp | 3298066 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640558014 |
|---|
| Product | precorrin-8X methylmutase |
|---|
| Protein accession | YP_001239167 |
|---|
| Protein GI | 148254582 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2082] Precorrin isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.757727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.930234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACC TGCGCGACTA CATCAAGGAT GGGGCGGAGA TCTATCGGCG CTCGTTCGCG
ACGATCCGCC GCGAAGCTGA CCTGACGCGC TTTCAGGGCC TGGAAGAGAA GATCGCCGTG
CGCATCATCC ACGCCTGCGG CATGGTCGAG ATCACGTCCG ACATCGAGAT CTCCGAACGC
TTCGCGGCCG AGGCACGCGC CGCGCTTGAT CGCGGCGCGC CGATCCTGTG CGATGCAAAG
ATGGTGGCGC AGGGCATCAC GCGCGCCAGA CTGCCTGCCA ACAACGAGAT CATCTGCACG
CTCGATGATC CCAAGGTTCC AGCTTTGGCC GCGCAGCTCG GCACGACGCG CTCGGCCGCG
GCGCTCGAAT TGTGGCGTCC GCATCTCGGC GGCGCGCTGG TCGCGATCGG CAACGCGCCG
ACGTCGCTGT TTCATCTGCT CGATATGCTG GACCAGGGCG CGCCGCGGCC GGCAGCGGTG
ATCGGAACAG CGGTCGGCTT CGTCGGCGCG CGCGAATCGA AGGAGGCGCT CGCGGCCGAT
GGCCGCGTGC CGTATCTGAT CGTGAAAGGA CGCAAGGGCG GCAGCGCGAT GGCCGTTGCG
GCGGTGAATG CCATCGCGAG CGATGCCGAA TGA
|
|---|
| Protein sequence | MSDLRDYIKD GAEIYRRSFA TIRREADLTR FQGLEEKIAV RIIHACGMVE ITSDIEISER
FAAEARAALD RGAPILCDAK MVAQGITRAR LPANNEIICT LDDPKVPALA AQLGTTRSAA
ALELWRPHLG GALVAIGNAP TSLFHLLDML DQGAPRPAAV IGTAVGFVGA RESKEALAAD
GRVPYLIVKG RKGGSAMAVA AVNAIASDAE
|
|---|
| |