Gene BBta_3144 details

Gene Information

• Locus tag: BBta_3144
• Symbol: cobN
• ID: 5150571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 3292748
• End bp: 3296170
• Gene Length: 3423 bp
• Protein Length: 1140 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640558012
• Product: cobaltochelatase subunit CobN
• Protein accession: YP_001239165
• Protein GI: 148254580
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases
• TIGRFAM ID: [TIGR02257] cobaltochelatase, CobN subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATCTCC TGGCGACATC CGGCGCAGAT CTCGACGACC TCGAACAGGC CGTGGATCTC 
GCACAGTCGC CGGCCGAGAT CGTGGTGCTG TCGTTTTCGG ACAGTGACCT GTCGGCGCTG 
GCGGGGGCGT GGACCGCATC GGCGGCCGAG TTGCCCAGCC TGCGGCTCGC CAGCCTGAAG 
CGGCTGAAGC ATCCCATGTC GGTGGATCTC TACATCGACA GCGTCATCCT CGGGGCGCGC 
GCCGTCGTCG TGCGTTGCCT CGGTGGGCTC GACTACTGGC GCTATGGGAT GGAGCGCATC 
GCGGCGGTTT GCCGGAGCCG CAAGATCCTG CTGGCGGCGC TGCCGGGAGA TGACCGCGCC 
GATGACCGGC TCGATGAGTT CTCGACCTTG CCGAAAGAGT CGACAGCGCG GCTGTATGGT 
TATCTGCACG AGGGCGGCAT CGGCAATGCG CGCGAGGCGC TGCACTATCT GGCCATGCTG 
CTCGGCCGCG ACGCGACGTT TGCCGAGCCG GTCGCGATCG GTTCGATCGT CGGCTTCGTG 
CCGGATCGTG GCGCCGTCGC CATCGACGAT CTCTGTTCTG GCGATGACAA GCGGCCAGCC 
GCGCTGATCG TGTTCTATCG CGCCAGCTTG CTTGCCGCCG ACACGGCGGG AATTGCGGAA 
CTGATGCGGA CGATCGAGCG CGGGGGGCTC GCCGCAGCGG CTGTGGCGGT CACCAGCCTC 
AAGGATCCGA GCATCGCGGA TGCGATGGGG CGATTGATCG CGACGCGGCG TCCCGCGATC 
ATCCTGAATG CGACCGCATT CTCTGCGTTG CGCGATGACG GCTCGACCGT GCTGGACGCA 
GCCGACGCGC CGGTGCTGCA GATCATCCAG GCGCAGAGCA CCGAAGAGGC CTGGGCCGCC 
TCGTCGCGCG GCCTTTCGCC GACCGATCTT GCCATGAATG TGGTGCTGCC GGAGCTGGAC 
GGCCGCTTGC TGGCGCGTCC GATCGCCTTC AAGGGCGAGG CCGCAGCGGA TGAGCGTCTG 
CAATTCGGCA CTATCAGCTA CGTTCCGCAG GCGGATCGTG CGTCCTATGT CGCCCGGCTC 
GCTGCGCGAT GGGCGCGGCT GCGCGCGGCG CCGGCAGGCG AGCGCCGTAT GGCGCTGATG 
CTGTCGGACT ACCCGGCGCG CGGCGGGCGT CGTGGCTATG CGGTCGGTCT CGACACCAGC 
GCGAGCGCTG CGGCCATTGC GCAGCTCCTC GCCCAGGCAG GATACGATCT TGGCGGTGCT 
CCACCGACCG CCGCGCAGAT CGAAGCGTTG CTGCGCGACG AGGCGGATGA CCTCGTCGTG 
CCGTTCGCGG TCTATCAAAG CGCTTTGAAG CTGTTGCCGG AAGGGCTGCA GGACGCGCTG 
CATGAGTGCT GGGGCGAGGC CGCGGCCGAC CCGGCATTTC GCGATGGCGC CTTTCGCTTT 
CCGGTGCTGC GCGCCGGAAA GCTTACAATT TTGCTGCAGC CGGATCGCGG CAGTCGTGCG 
GACCGCAAAT CCGGCTATCA CGACACGACC GTGCCGCCGC GGCATGGCTA CGTCGCGCTC 
TATGCGCATC TGCGCGAGGT CGAGACGATC GATGCCCTGG TTCATCTCGG CGCGCATGGA 
ACGCTGGAAT GGCTGCCGGG CAAGGCGCTG GCGCTGTCGA ACACATGCTG GCCGGAGGCC 
GTGCTCGGCC CGCTTCCCGT CATCTATCCG TTCATCGTCA ACAATCCCGG CGAGGCGATG 
CAGGCCAAGC GCCGGCTTGC GGCGCTGACG CTCGGACATC TCACGCCGCC GCTGGCGCAG 
GCCGGTCTGC ACGGACCGTT GCTGGAGCTG GAGGGGCTGG TCGAAGAATA TGCCGAAGCC 
GATGGGCTCG ATCGGCGCCG CCTCAGACTG CTGGAAGACG AGATCATCGC GCGGGCCTGG 
CAGAGCGGTC TCGCCGCCGA TTGCGGGCTC GACCGCACCA TGAACGGCCG CGAGGCGGTG 
GCGCAGCTCG ACGCCCAGCT CTGCGATATC AAGGAGCTGG CGGTGCGCGA CCGCCTCCAT 
GTGTTCGGCC AGGCTCCGGA CGCGCCGGCG GCCGGCCTGC TCATCGACGC GATCGCGGCA 
GCCGCTGGCC AGGCGGGCGG CGCCGTCGAT CGCGCCGACG TCGAAACCCG AATTCACGCG 
AGCGTCGTCG CCGAGCGCGA GGCGCTGCTG GCCGCGCTCG ATGGCCGCCG CGTGGCGGCC 
GGGCCCGCTG GCGCGCCGAG CCGCGGCCGT CTCGACGTGC TGCCCACCGG GCGCAATCTG 
ACTGCGATCG ACCCGCGGGC CATTCCGACC CGGACCGCGG CCGTGGTCGG CGTGCGCGCG 
GCCGACGAGG TGATCCGGCG TTATCTTCAG GACCACGGCG ATTATCCGCG GTCGCTGATG 
CTCGATCTCT GGGCTTCCGC ATCGCTGCGA ACCGGCGGTG ACGATCTCGC CCAGGCGCTG 
GCCTATCTCG GCGTGCGCCC GCGCTGGGAT CTGAATTCGA ACCGCGTCAC CGGCATCGAT 
GTGCTGCCTT TGGCGATGCT CGATCGGCCG CGCATCGACG CGACGCTGCG CATCTCGGGA 
TTGTTTCGCG ACCTGTTCGA AGCGCAGATC GCGCTGTTCG ATCTCGCCGT GCAGAAGGTC 
GCCGTGCTCG ACGAGGACGA TGCCGACAAT CCCTTGGCCG CGGCGCGGCG GCGCGGCGAG 
AGCCTCGCGC GCGTGTTCGG TGGCGCGCCC GGCAGCTACG GCGCCGTCGC CGCCGACCTC 
GCGCTCGGGA TGACATGGGA AACCCGATCG CAGCTCGGCG ACGCCTATCT GGACGGCAGC 
GGCTATAGTT TCGGCGGAGG GCATGACGGC GTGTCGGCCG CCGCGACGTT TCGTGACCGG 
GTTCGCAGCA TCGATGCGCT GGTGCATCCG CAGGACGATC GTGAGCGCGA TCTGCTGGAC 
GGCGAGGAGG TCGCCGACTT CGCCGGCGGC TTCGCCGCTG CGGCCGCATC GCTCGGCGCG 
ACACCCGCGC TGCTGCATCT CGACACCAGC CGGCCCGACC AGCCGAAGGC ACGCACGTTT 
GACGAGGAGA TCGCCCGTGT GGTGCGCGGC CGACTCACCA ATCCGCGTTG GATCTCGGGC 
ATGCTCGCCC ACGGCTATCG CGGCGTCGCC GAGATCGCGC AAGGAATCGA CGCGCTCTAC 
GCTTTCGCGG CCACGTCGGA CAGCGTTCCC GAGCATCTGT TTGATCTGGC GCATGGGGCG 
TTGCTGCGCG ACGAGGCAGT GTTGGACGGC ATGATCGCGC GCAATCCGGC GGCCGTGGCC 
GCCATTCTGT CGCGGTTCGA GGATGCGCTG CGCCGACGCC TCTGGGTGCC GCGTCGCAAT 
GCTGTTGCTG ACGAGCTTGC GCTGGCCCAT ACGCGCCTCG TGCCAACGGA GAGAGTGTCG 
TGA 

 

Protein sequence

MHLLATSGAD LDDLEQAVDL AQSPAEIVVL SFSDSDLSAL AGAWTASAAE LPSLRLASLK 
RLKHPMSVDL YIDSVILGAR AVVVRCLGGL DYWRYGMERI AAVCRSRKIL LAALPGDDRA 
DDRLDEFSTL PKESTARLYG YLHEGGIGNA REALHYLAML LGRDATFAEP VAIGSIVGFV 
PDRGAVAIDD LCSGDDKRPA ALIVFYRASL LAADTAGIAE LMRTIERGGL AAAAVAVTSL 
KDPSIADAMG RLIATRRPAI ILNATAFSAL RDDGSTVLDA ADAPVLQIIQ AQSTEEAWAA 
SSRGLSPTDL AMNVVLPELD GRLLARPIAF KGEAAADERL QFGTISYVPQ ADRASYVARL 
AARWARLRAA PAGERRMALM LSDYPARGGR RGYAVGLDTS ASAAAIAQLL AQAGYDLGGA 
PPTAAQIEAL LRDEADDLVV PFAVYQSALK LLPEGLQDAL HECWGEAAAD PAFRDGAFRF 
PVLRAGKLTI LLQPDRGSRA DRKSGYHDTT VPPRHGYVAL YAHLREVETI DALVHLGAHG 
TLEWLPGKAL ALSNTCWPEA VLGPLPVIYP FIVNNPGEAM QAKRRLAALT LGHLTPPLAQ 
AGLHGPLLEL EGLVEEYAEA DGLDRRRLRL LEDEIIARAW QSGLAADCGL DRTMNGREAV 
AQLDAQLCDI KELAVRDRLH VFGQAPDAPA AGLLIDAIAA AAGQAGGAVD RADVETRIHA 
SVVAEREALL AALDGRRVAA GPAGAPSRGR LDVLPTGRNL TAIDPRAIPT RTAAVVGVRA 
ADEVIRRYLQ DHGDYPRSLM LDLWASASLR TGGDDLAQAL AYLGVRPRWD LNSNRVTGID 
VLPLAMLDRP RIDATLRISG LFRDLFEAQI ALFDLAVQKV AVLDEDDADN PLAAARRRGE 
SLARVFGGAP GSYGAVAADL ALGMTWETRS QLGDAYLDGS GYSFGGGHDG VSAAATFRDR 
VRSIDALVHP QDDRERDLLD GEEVADFAGG FAAAAASLGA TPALLHLDTS RPDQPKARTF 
DEEIARVVRG RLTNPRWISG MLAHGYRGVA EIAQGIDALY AFAATSDSVP EHLFDLAHGA 
LLRDEAVLDG MIARNPAAVA AILSRFEDAL RRRLWVPRRN AVADELALAH TRLVPTERVS