| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3139 |
|---|
| Symbol | cobO |
|---|
| ID | 5149865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3289119 |
|---|
| End bp | 3289727 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640558006 |
|---|
| Product | Cob(I)yrinic acid a,c-diamide adenosyltransferase |
|---|
| Protein accession | YP_001239160 |
|---|
| Protein GI | 148254575 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2109] ATP:corrinoid adenosyltransferase |
|---|
| TIGRFAM ID | [TIGR00708] cob(I)alamin adenosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.250441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.761993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA GCGCCGAGGA TGCCCGCCAC AAGGCCAAGA TGGAGAATCG CAAGGCGGTT
CAGGATGCCG AGGTGGCGTC GAAGACCGTC GAAAAGGGCC TGCTGATCGT CCACACCGGC
AAAGGCAAGG GCAAGTCGAC CGCGGCCTGG GGCCTGATGC TGCGCGCTCT GGGCCGCGGC
TTTCGCATCG GCGTCGTGCA GTTCGGCAAG GGTGCGTGGG AGACCGGGGA GCGCAAGGCG
ATCGAGCGTT TCGGCGATCA GGTGTCGTGG CACACGCTCG GCGAAGGCTT CACTTGGGAG
ACGCAGGATC GCGCGCGCGA CGTCGCCGCG GCCGAGCGCG CCTGGGGCAA GGCGAAGGAG
CTGATGGCCG ATCCCACGAT CCGGCTGCTG ATCCTCGACG AGCTCAACAT CGCCTTGCGT
TATGACCATC TGCCGATCGG CGACGTGGTC GCAACGCTGG CCGGGCGCCG CCCCGATCTG
CACGTCGTCG TCACCGGCCG CAACGCCAAG CCGGAGCTGA TCGAGGCCGC CGATCTCGTC
ACCGAGATGA ACCTCGTCAA GCATCACTTC GCGGCCGGCG TGAAGGCGCA GGAAGGCATC
GAGTACTAG
|
|---|
| Protein sequence | MTESAEDARH KAKMENRKAV QDAEVASKTV EKGLLIVHTG KGKGKSTAAW GLMLRALGRG
FRIGVVQFGK GAWETGERKA IERFGDQVSW HTLGEGFTWE TQDRARDVAA AERAWGKAKE
LMADPTIRLL ILDELNIALR YDHLPIGDVV ATLAGRRPDL HVVVTGRNAK PELIEAADLV
TEMNLVKHHF AAGVKAQEGI EY
|
|---|
| |