Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3117 |
Symbol | |
ID | 5149127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3269324 |
End bp | 3270661 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640557987 |
Product | MFS family transporter |
Protein accession | YP_001239141 |
Protein GI | 148254556 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.209851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATG AGCTCGAAGT CAGGACGATC GCCAAGATCA CCGCGCGCCT CGTTCCGTTC CTGGTGATCT GCTATTTCGT CGCCTATCTC GACCGGGTGA ATGTCGGGTT CGCCGCACTC ACCATGAACC AGGACCTCGG CCTCTCACAG ACGGCGTTCG GCTTCGGTGC CGGCATCTTC TTCGTTGCCT ATTTCATCTT CGAAGTCCCA TCCAACCTGT TGCTGGAACG GTTCGGTGCG CGCCGATGGA TCGCGCGGAT CATGCTGAGC TGGGGCGTCC TGTCCGGATT GATGGCCTGT CTTCCCTGGA TCTCGCGGGT GACGGGGCTT GGCCATGAAA CCACCTTCTA CGTTCTGCGC GTCCTGCTCG GTGCCGCAGA AGCCGGCTTC TTCCCGGGCA TCATCTTCTA TCTCACCCTC TGGTTTCCAG CCGAGTATCG CGCCAGGATC GTCGGCTACT TCATGGCCGC GATTCCGCTT TCGACCGTGA TCGGCGCCCC GGTGTCGGGC GTCCTGCTGT ATCTGCACGG CGGCTTCGGC CTTGCGGGAT GGCAATGGCT GTTTCTCATC GAGGCGATCC CGGCAGTGAT CCTGGCCGTC GTCGTGTTCT TCTATCTGAC AGACCGCCCC GAGGACGCCG GCTGGCTGGC GCGCGATGAG CAGGAATGGC TCAGTCGCCG GCTCCTGGTC GAGCGGCGCC AGCGCGAGGC GGCCCGGACC TACACGGTCT CCGAGGTCCT GTTCGACCGG CGCGTGATCA GCCTCAGCCT GATTTATTTT GGCGCGGTCG CGACCAATTA CGGCCTCAGC TTCTTCCTGC CGCAGATCGT CAAGGCATTC GGCCTCAACA CCTTCCTGAC GACTCTCGTG TCGGCGGCGC CCTACCTCGT CGGCGTCATC GGCATGGTCT GGTGGGGCCG GCGCTCGGAC CGGGCTGCGG AGCGCACCTA TCATGCGGCC ATCCCGTTAT TGGTCGCGTC GGGCGGCCTC GTCCTGGCCG TGCTGGTCGC CGATCCGAGC TTGAATATGG TCGCCTTCTG TATTGCAGGA TTCGGCATCT TCGCCTGCCT TCCGGTGTTC TGGACGTTGC CGACCGCCTT CCTGTCGGGT GCAGCGGCGG CCGCCGGAAT CGCCGTCGTC AACTCGATCG GCAACCTCGC TGGCTTCGCC GGCCCGTTCG CGATGGGGTG GCTCAGGGAC CAGACGGGCA GTTATACCGA CGGCCTGTTG CTGCTCGCCG GGCTCGGCAT CGTCGCGATG GGGATCGTGC TTGGTATCGG CCACGACACG GCGCTCGAGC GCGCGCCCTC AGGCGAGCAC GCGGCGATGC GGGAGTGA
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Protein sequence | MSHELEVRTI AKITARLVPF LVICYFVAYL DRVNVGFAAL TMNQDLGLSQ TAFGFGAGIF FVAYFIFEVP SNLLLERFGA RRWIARIMLS WGVLSGLMAC LPWISRVTGL GHETTFYVLR VLLGAAEAGF FPGIIFYLTL WFPAEYRARI VGYFMAAIPL STVIGAPVSG VLLYLHGGFG LAGWQWLFLI EAIPAVILAV VVFFYLTDRP EDAGWLARDE QEWLSRRLLV ERRQREAART YTVSEVLFDR RVISLSLIYF GAVATNYGLS FFLPQIVKAF GLNTFLTTLV SAAPYLVGVI GMVWWGRRSD RAAERTYHAA IPLLVASGGL VLAVLVADPS LNMVAFCIAG FGIFACLPVF WTLPTAFLSG AAAAAGIAVV NSIGNLAGFA GPFAMGWLRD QTGSYTDGLL LLAGLGIVAM GIVLGIGHDT ALERAPSGEH AAMRE
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