Gene BBta_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3117 
Symbol 
ID5149127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3269324 
End bp3270661 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID640557987 
ProductMFS family transporter 
Protein accessionYP_001239141 
Protein GI148254556 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.209851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATG AGCTCGAAGT CAGGACGATC GCCAAGATCA CCGCGCGCCT CGTTCCGTTC 
CTGGTGATCT GCTATTTCGT CGCCTATCTC GACCGGGTGA ATGTCGGGTT CGCCGCACTC
ACCATGAACC AGGACCTCGG CCTCTCACAG ACGGCGTTCG GCTTCGGTGC CGGCATCTTC
TTCGTTGCCT ATTTCATCTT CGAAGTCCCA TCCAACCTGT TGCTGGAACG GTTCGGTGCG
CGCCGATGGA TCGCGCGGAT CATGCTGAGC TGGGGCGTCC TGTCCGGATT GATGGCCTGT
CTTCCCTGGA TCTCGCGGGT GACGGGGCTT GGCCATGAAA CCACCTTCTA CGTTCTGCGC
GTCCTGCTCG GTGCCGCAGA AGCCGGCTTC TTCCCGGGCA TCATCTTCTA TCTCACCCTC
TGGTTTCCAG CCGAGTATCG CGCCAGGATC GTCGGCTACT TCATGGCCGC GATTCCGCTT
TCGACCGTGA TCGGCGCCCC GGTGTCGGGC GTCCTGCTGT ATCTGCACGG CGGCTTCGGC
CTTGCGGGAT GGCAATGGCT GTTTCTCATC GAGGCGATCC CGGCAGTGAT CCTGGCCGTC
GTCGTGTTCT TCTATCTGAC AGACCGCCCC GAGGACGCCG GCTGGCTGGC GCGCGATGAG
CAGGAATGGC TCAGTCGCCG GCTCCTGGTC GAGCGGCGCC AGCGCGAGGC GGCCCGGACC
TACACGGTCT CCGAGGTCCT GTTCGACCGG CGCGTGATCA GCCTCAGCCT GATTTATTTT
GGCGCGGTCG CGACCAATTA CGGCCTCAGC TTCTTCCTGC CGCAGATCGT CAAGGCATTC
GGCCTCAACA CCTTCCTGAC GACTCTCGTG TCGGCGGCGC CCTACCTCGT CGGCGTCATC
GGCATGGTCT GGTGGGGCCG GCGCTCGGAC CGGGCTGCGG AGCGCACCTA TCATGCGGCC
ATCCCGTTAT TGGTCGCGTC GGGCGGCCTC GTCCTGGCCG TGCTGGTCGC CGATCCGAGC
TTGAATATGG TCGCCTTCTG TATTGCAGGA TTCGGCATCT TCGCCTGCCT TCCGGTGTTC
TGGACGTTGC CGACCGCCTT CCTGTCGGGT GCAGCGGCGG CCGCCGGAAT CGCCGTCGTC
AACTCGATCG GCAACCTCGC TGGCTTCGCC GGCCCGTTCG CGATGGGGTG GCTCAGGGAC
CAGACGGGCA GTTATACCGA CGGCCTGTTG CTGCTCGCCG GGCTCGGCAT CGTCGCGATG
GGGATCGTGC TTGGTATCGG CCACGACACG GCGCTCGAGC GCGCGCCCTC AGGCGAGCAC
GCGGCGATGC GGGAGTGA
 
Protein sequence
MSHELEVRTI AKITARLVPF LVICYFVAYL DRVNVGFAAL TMNQDLGLSQ TAFGFGAGIF 
FVAYFIFEVP SNLLLERFGA RRWIARIMLS WGVLSGLMAC LPWISRVTGL GHETTFYVLR
VLLGAAEAGF FPGIIFYLTL WFPAEYRARI VGYFMAAIPL STVIGAPVSG VLLYLHGGFG
LAGWQWLFLI EAIPAVILAV VVFFYLTDRP EDAGWLARDE QEWLSRRLLV ERRQREAART
YTVSEVLFDR RVISLSLIYF GAVATNYGLS FFLPQIVKAF GLNTFLTTLV SAAPYLVGVI
GMVWWGRRSD RAAERTYHAA IPLLVASGGL VLAVLVADPS LNMVAFCIAG FGIFACLPVF
WTLPTAFLSG AAAAAGIAVV NSIGNLAGFA GPFAMGWLRD QTGSYTDGLL LLAGLGIVAM
GIVLGIGHDT ALERAPSGEH AAMRE