| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3113 |
|---|
| Symbol | |
|---|
| ID | 5149017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3263047 |
|---|
| End bp | 3264324 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640557983 |
|---|
| Product | formyl-coenzyme A transferase |
|---|
| Protein accession | YP_001239137 |
|---|
| Protein GI | 148254552 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | [TIGR03253] formyl-CoA transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.429937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGG CGCTCGAGGG CGTTCGCATT CTCGACTTCA CCCACGTCCA GTCCGGACCG
ACCTGCACCC AGCTGCTGGC CTGGTTCGGC GCCGACGTGA TCAAGGTCGA GCGGCCGGGC
GTGGGTGACA TCACCCGCGG CCAGCTGCAG GACATTCCCA ACGTGGACAG CCTGTATTTC
ACGATGCTGA ACCACAACAA GCGGTCGATC ACGCTCGACA CCAAGAACCC CAAGGGCAAG
GAGGTTCTGA CCGAGCTGAT CAAGAAGTGC GACGTGCTGG TCGAGAATTT CGGCCCCGGC
GTGCTTGACC GCATGGGCTT CCCCTGGGAG AAGATCCAGG CCATCAACCC GAAGATGATC
GTCGCCTCGA TCAAGGGTTT CGGCCCTGGC CCTTACGAGG ACTGCAAGGT CTACGAGAAC
GTCGCGCAGT GCACCGGCGG CGCCGCCTCG ACCACCGGCT TCCGTGACGG CCTGCCGCTG
GTCACCGGCG CGCAGATCGG CGATTCCGGC ACCGGCCTGC ACCTCGCGCT CGGCATCGTC
ACCGCGCTCT ATCAGCGCAC CCATACCGGC AAGGGCCAGC GCGTCACGGC TGCGATGCAG
GACGGCGTGC TCAACCTCTG CCGTGTCAAG CTGCGCGACC AGCAGCGCCT GGAGCGCGGC
CCGCTCAAGG AATACAGCCA GTTCGGTGAG GGCGTTCCGT TCGGCGACGC CGTGCCGCGC
GCCGGCAACG ATTCCGGCGG TGGCCAGCCG GGCCGCATCC TGAAGTGCAA GGGCTGGGAG
ACCGACCCGA ACGCCTACAT CTACTTCATC ACCCAGGCCC CGGTCTGGGA GAAGATCTGC
GACGTGATCG GCGAGCCCAC CTGGAAGACC GATCCGAACT ACGCCAAGCC GGCCGCCCGC
CTGCCGCGCC TGAACGAGAT CTTCGGCCGC ATCGAGCAGT GGACCATGAC CAAGACCAAG
TTCGAGGCCA TGGACATCCT CAACGAGTTC GACATCCCCT GCGGCCCGAT CCTGTCGATG
AAGGAGATCG CCGAGGACGA GTCGCTGCGC AAGACCGGCA CCCTGGTCGA GGTCGACCAC
CCGACCCGCG GCAAATATCT CTCGGTCGGC AACCCGATCA AGCTGTCGGA CAGCCCGGCC
GAGGTGACCC GCTCGCCTTT GCTCGGCGAG CACACCGATG AGATCCTGCG CCAGGTGCTT
GGCTTCAGCG ACCACCAGGT CGCCGAGATC CACGACTCCG GCGCGCTCGA TCCACCGCGT
AAGGAAGCTG CGGAGTAA
|
|---|
| Protein sequence | MTKALEGVRI LDFTHVQSGP TCTQLLAWFG ADVIKVERPG VGDITRGQLQ DIPNVDSLYF
TMLNHNKRSI TLDTKNPKGK EVLTELIKKC DVLVENFGPG VLDRMGFPWE KIQAINPKMI
VASIKGFGPG PYEDCKVYEN VAQCTGGAAS TTGFRDGLPL VTGAQIGDSG TGLHLALGIV
TALYQRTHTG KGQRVTAAMQ DGVLNLCRVK LRDQQRLERG PLKEYSQFGE GVPFGDAVPR
AGNDSGGGQP GRILKCKGWE TDPNAYIYFI TQAPVWEKIC DVIGEPTWKT DPNYAKPAAR
LPRLNEIFGR IEQWTMTKTK FEAMDILNEF DIPCGPILSM KEIAEDESLR KTGTLVEVDH
PTRGKYLSVG NPIKLSDSPA EVTRSPLLGE HTDEILRQVL GFSDHQVAEI HDSGALDPPR
KEAAE
|
|---|
| |