Gene BBta_3095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3095 
Symbol 
ID5150867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3242778 
End bp3244166 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content68% 
IMG OID640557965 
Productputative cation-efflux pump 
Protein accessionYP_001239119 
Protein GI148254534 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCGTCTCCCA TGTCGATTCC GGAAAGGTCC GCGTCGCTGC GATTTCGATC 
GCGGCGAGCG CCAGCATGGC CGCGGCGAAG TTCGTCGTCG GCGTCCTGAT CGGCAGCCTC
GCGCTGGTCT CGGAGGCGTT GCACAGCGCG GTAGACGTCG TCGCGACCGT CATCACCTGG
ATGGTCGTTC GGGTATCGGA CCGGCCCGCC GATGACGAAC ATCATTATGG CCATGGCAAA
CTGGAGAGCC TGTCGGCACT CGGCGTGATC GCCCTGCTCT ACGTGCTTGC CGGCGGCGTG
CTGGTCGAAT CGGTCAGCCG CTTGCGCGAG GCGGCGCCGC CGCCGACGCT CTCGGCCGTT
CCATTCCTGG TTCTGCTCAT CGACATCGCC GTCAACTTCT GGCGCGCCCG CGCGCTGCAT
CGGGCGGCTC ACGAGACGCA CAGCCAGGCG CTGGCGGCGG ATGCGCTGCA TTTCGCCTCG
GACGTGCTGG GCTCGGTCGC CGTGATCGCC GGTCTTGTGC TGACGGCGCT CGGATTCTGG
TGGGGCGATT CCGCCGCGGC CATCGCGGTG GCGCTGATGA TCTCGGTGCT CGGCCTGCGG
CTGGCGCGCT CCACCGTGGA AACCCTGCTC GACCGCGCGC CGGACGGGGC GGCCGAGAAG
GCGCGCGCCG CGATCCGGTC CGTGGCCGGC GTCGTCGACG TCGAGCGGCT GCGCGTCCGC
CTCGTCGGCG CGACGCATTT CGTCGATGCC ACGGTGCAGG TGCCGCGCAC CTACCCGATC
GACCGCGTTC ATGACATCAA GCGCGACGCG CAGGCCGCCG TCGATGCCAG CCTCGCCGGT
GCGGACGTGA CCTTCACGAC CGTGCCGGTC GCGCTGAGCA ATGAGAGCGT GCGCGAGCGC
ATCATGGTGA TCGCGCGCAA TTCCGGCCTC GCCATCCATC ACGTCACCGT CCACGACGTT
GGCGGACGGC TGATCGTGGC CATCGACCTC GAGGTCGACG GCGACATGAC CCTGGTCGCG
GCGCATGCGA TCGCGCACGA GCTGGAGCGC AGCATCCGCG AGGAGTTCGG CGCCGACGTC
GAGGTCGACA CGCATATCGA ACCGCTGGAG CCGGAATTGC CGTTCGGCGT CGACTCACCG
CCCGAATTTG TTGCGCAGAT CGCAGCAGCC TTGCAGCGCT TCGCGGCCGA GACCGACATG
TACGACGTGC ACAATGTCCG CGTCCGCAAC ACCGAAGCCG GCGAGATCGT CAACTTTCAC
TGCCGCGCCG CGCCGTCCAT GAGCGTGCTG AAGGTGCACG ACAATGTCGA TCACATCGAG
CGCGGGCTGC GGCGCGCGTT CCCGAGCGTC AAGCGCGTCA TCAGCCACGC CGAGCCGCCA
CACGGCTAA
 
Protein sequence
MNDAVSHVDS GKVRVAAISI AASASMAAAK FVVGVLIGSL ALVSEALHSA VDVVATVITW 
MVVRVSDRPA DDEHHYGHGK LESLSALGVI ALLYVLAGGV LVESVSRLRE AAPPPTLSAV
PFLVLLIDIA VNFWRARALH RAAHETHSQA LAADALHFAS DVLGSVAVIA GLVLTALGFW
WGDSAAAIAV ALMISVLGLR LARSTVETLL DRAPDGAAEK ARAAIRSVAG VVDVERLRVR
LVGATHFVDA TVQVPRTYPI DRVHDIKRDA QAAVDASLAG ADVTFTTVPV ALSNESVRER
IMVIARNSGL AIHHVTVHDV GGRLIVAIDL EVDGDMTLVA AHAIAHELER SIREEFGADV
EVDTHIEPLE PELPFGVDSP PEFVAQIAAA LQRFAAETDM YDVHNVRVRN TEAGEIVNFH
CRAAPSMSVL KVHDNVDHIE RGLRRAFPSV KRVISHAEPP HG