| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3094 |
|---|
| Symbol | |
|---|
| ID | 5150866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3240246 |
|---|
| End bp | 3242570 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640557964 |
|---|
| Product | two-component sensor histidine kinase |
|---|
| Protein accession | YP_001239118 |
|---|
| Protein GI | 148254533 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTG CGCATGCCGC GAACGCGTGC GTCCAATCTT CTGATTCCAT CAAGGGGTTG
GCGCAATCGA TCGCGAAACC GGCCTATCAA AGGCTGCTGA CTGCTGAGCC GGTATTGCGT
CGTGCTGTCC CTACTTTGAT CATCGCCTTT CTTGTCACCA TCTGCCTCGG CGCCTTCGTC
CAGGTGCTCG ACCAGAGCCG GCAGAAGCGC GCCGCGACCA AGCGCGACCT CACCGCGGTC
TCCGACCTGC TCGCGGACCG CATCGGCCAT ATGGCGATGC GTCCGGACCG GGTTGCCCAT
ATCGAGCACC TGCAGAGCCT GCTGCCGGAT ATGATTCCCG CCTGGGGCGC CGCGCCCGGC
CGCCACGTGA TCGTCACCGG CGCCGACCAC CGCATCCTGG CCCGCGTGCC GGTCGATGCC
GCGCTCGGCG AGAACGACCG CATCCTCGAC CTGATCTCGA CGGCCCAACT GCTGGCGACG
CCGGGGCTGC AGGGCGCGGT CACCGAGATC ACGCTGCCGA ACGGCCGGCC GGCATTTGCG
ATCTCACAGC TGATCAAGGC CCTGCCCGGC CGCGTCGTCA TCATCCAGGA GAAGCTGGAG
CCGATCTGGG GATCGGACGC CGCGCTGTCC GTCACGCTGT CCGCCACCAC CGGATTCGTC
GTGCTGATCC TCGGCTTCGC CTTCCACTGG CAGTCGACCC GCGCTCGCGA GGGCGACCTC
ATCAACGATG CCGTGCGCGG ACGGATCGAC ACCGCGCTCA ACCGCGGCCG CTGCGGCCTG
TGGGACTGGG ACCTGTCGCG CGGGCGGATC TTCTGGTCGA ACTCGATGTT CGAGATGCTC
GGCCTCGACA ACCGCACCGA CCTCCTCACC TTCGGCGAGG TCAATGCGCT GGTGAACTCC
GACGACATCG ACCTGTTCGC GATCGCCGAC CAGCTGGTCG CCGGCGACAT CCACCAGATC
GACCAGAGCT TCCGGATGCG TCACACCGAG GGTCACTGGA TCTGGCTCCG CGTGCGCTGT
GAGCTCAGCC AGGGCACCAC GGCTTCCGGC CTTCACCTGA TCGGCATCGC GGTCGACATC
ACCGAGCAGA AGAGCCTCGC CGAGAAGACC GTCGAGGCTG ATCTCAGGCT GCGCGACGCG
ATCGAGACCA TCTCCGAAGC CTTTGTGCTG TGGGACGCCA ACAACCGCCT CGTGCTGTGC
AACTCGCACT TCCAGAAGCT GCACAAGCTG CCGGACTCCG CCGTCATCCC CGGCACCTCC
TACGAGACCG TCATCGAGGT TGGCAAAATG CCGGAGATCC GCACCCGGCT GCACGACCAC
AGCCAGCAAT CCCCGGGCGC GCGCACCTTC GAGGCACAGC TCGACGATGG CAGCTGGCTG
CATATCAGCG AGCGCCGCAC CAAGGACGGC GGCTACGTGT CGGTCGGCAC CGACATCACC
CGCATCAAGG AGCACGAGCA GAAGCTCGTC GACAATGACC TGCGCCTGCG CGCCACCGTC
ATCGACCTGC AGCGGTCACA GAGCGCGCTG GAGCGCCAGG CGATCGAGCT CGCCGACCTC
GCCGAGAAGT ACTCGCAGGA AAAGACCCGC GCCGAGGAAG CCAACCAGAC CAAGTCGAAA
TTCCTCGCCA ATATGAGCCA CGAGCTGCGC ACGCCGCTCA ACGCCATCAT CGGCTTCTCC
GAGATCATGG GCAGCGGCAT GTTCGGCTCG CTCGGCTCGG AGAAGTACCA GGAATACTGC
CACGACATAC TGACGTCGGG TCAGTATCTG CTCGAGGTCA TCAACGACAT CCTCGACATG
TCCAAGATCG AGGCCGGCCG CATGAAGCTC GACATGGAGC CGCTCGACCT CGCCAAGACC
CTGGCCGAGT CGCTGCGCGT CGTCTCCGGC CGCGCGCAGG ACAAGCGCCT GGTGCTCGAC
GCCGACATCG AGGGCAACAT CCCGATCGTC GCCGACCGCC GCGCCACCAA GCAGATCATG
GTCAATCTGC TGTCCAACGC GGTCAAGTTC ACGCCCGAAG GCGGCCGGGT CACGATGCGC
AGCCGCGTGT TCGACGACAA GGTCGTGCTC ATCATCGCCG ATACCGGCAT CGGCATTCCC
GCGCAGTCGC TGGCGCGGCT CGGCCGCCCG TTCGAGCAGG TCGAGAGCCA GATGACCAAG
ACCTATCACG GCTCCGGCCT GGGCCTCGCC ATCGCCCGCT CTCTGACCCA GCTGCATGGC
GGCTCGATGC GGCTGCGCTC GCGGATCGAG TCCGGCACCG TGGTCCGCGT CACCCTGCCC
CGCGATGCCT ACAAGGCCAC GGCGAGCATC TCGGTCGCGG CGTGA
|
|---|
| Protein sequence | MARAHAANAC VQSSDSIKGL AQSIAKPAYQ RLLTAEPVLR RAVPTLIIAF LVTICLGAFV
QVLDQSRQKR AATKRDLTAV SDLLADRIGH MAMRPDRVAH IEHLQSLLPD MIPAWGAAPG
RHVIVTGADH RILARVPVDA ALGENDRILD LISTAQLLAT PGLQGAVTEI TLPNGRPAFA
ISQLIKALPG RVVIIQEKLE PIWGSDAALS VTLSATTGFV VLILGFAFHW QSTRAREGDL
INDAVRGRID TALNRGRCGL WDWDLSRGRI FWSNSMFEML GLDNRTDLLT FGEVNALVNS
DDIDLFAIAD QLVAGDIHQI DQSFRMRHTE GHWIWLRVRC ELSQGTTASG LHLIGIAVDI
TEQKSLAEKT VEADLRLRDA IETISEAFVL WDANNRLVLC NSHFQKLHKL PDSAVIPGTS
YETVIEVGKM PEIRTRLHDH SQQSPGARTF EAQLDDGSWL HISERRTKDG GYVSVGTDIT
RIKEHEQKLV DNDLRLRATV IDLQRSQSAL ERQAIELADL AEKYSQEKTR AEEANQTKSK
FLANMSHELR TPLNAIIGFS EIMGSGMFGS LGSEKYQEYC HDILTSGQYL LEVINDILDM
SKIEAGRMKL DMEPLDLAKT LAESLRVVSG RAQDKRLVLD ADIEGNIPIV ADRRATKQIM
VNLLSNAVKF TPEGGRVTMR SRVFDDKVVL IIADTGIGIP AQSLARLGRP FEQVESQMTK
TYHGSGLGLA IARSLTQLHG GSMRLRSRIE SGTVVRVTLP RDAYKATASI SVAA
|
|---|
| |