| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3090 |
|---|
| Symbol | fdsB |
|---|
| ID | 5155641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3236324 |
|---|
| End bp | 3237880 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640557960 |
|---|
| Product | putative formate dehydrogenase beta subunit |
|---|
| Protein accession | YP_001239114 |
|---|
| Protein GI | 148254529 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.574941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC GTCTTTTTGT CCCGTGTGAT GCCGGCGCGC TCGCCGTCGG CGCCGATGAG
GTTGCGCAGG CCTTGCACAA GGCTGCGCTT GAACGCGGAG CCGAGGTCGA GATCGTCCGC
AACGGGTCCC GCGGCCTGTA CTGGCTGGAG CCGCTGGTCG AGCTGGAGAC GGCGCAGGGC
CGGTTCGGCT TCGGTCCGGT GACCGCTGAC GACGCGCCGT CGCTGCTCGA CGCCATCATC
GCCGACAAGC CGCATAAACT GTCGCTCGGC CTGACCGAGG AGATTCCGTG GCTGAAGCGG
CAGACCCGCC TCACCTTCGC CCGCTGCGGC ATCGTCGATC CGCTCTCGCT GGACGACTAC
CGCGCCCATG GCGGCTACAA GGGCCTCACC CGCGCCCTGA CGCTGACGCC GGATGCGGTC
ATCGCCGAGG TCACGACGTC CGGCCTGCGC GGCCGTGGCG GCGCCGGCTT CCCGACCGGC
ATCAAGTGGA AGACGGTGTC GCAGACCGCG GCCGATCGCA AATACGTCAT CTGCAACGCC
GATGAAGGCG ACAGCGGCAC CTTCGCCGAC CGCATGCTGA TGGAGGGGGA TCCCTTCGTG
CTGATCGAAG GCATGACCAT CTGCGGCATC GCGGTGGGCG CCACCAAGGG CTACATCTAC
ACCCGCTCGG AATATCCGCA CGCGATCGCG ACCATGGCCA AGGCGATCGA GATCGCCAAG
AAGGCCGGCC TGCTCGGCGA CAAGATCGCC GGCTCCAACT ACACCTTCGA TCTCGAGGTC
CGCACCGGCG CCGGCGCCTA TGTGTGCGGC GAAGAGACCG CGTTGATGGA GAGCCTGGAA
GGCAAGCGCG GCGTGGTCCG CGCCAAGCCG CCACTGCCGG CGCATCACGG CCTGTTCGGC
AAGCCGACCG TCGTCAACAA TCTGCTGTCG TTCGCCGCCA TTCCCTTCAT CCTCGACGAG
GGCGCCAAGG CCTATGCCGA TTTCGGCATG GGGCGCTCGC GCGGCACGAT GCCGATCCAG
ATCGCGGGGA ACGTCAAGTT CGGCGGCCTG TTCGAGACCG CGTTCGGCAT CACGCTCGGT
GAACTGGTCG ACGACATCGG CGGCGGCACC TTCACTGGCC GCCCGGTGCG CGCGGTGCAG
GTCGGCGGGC CGCTCGGCGC CTACTTCCCG CGGGCGCTGT TCGATACCCC GTTCGACTAC
GAGGCGTTCG CCGCCAAGGA TGGCCTGATC GGCCATGGCG GCATCGTCGT GTTCGACGAC
ACCGTCGACA TGTCGAAGCA GGCGCGCTTC GCGATGGAGT TCTGCGCCAT CGAATCCTGC
GGCAAGTGCA CGCCCTGCCG CATCGGCTCG ACGCGCGGCG CCGAGACCAT CGACAAGATC
CGCCGCGGCG AGCGCGTCGC CGAGAACATT GCGCTGGTCG AAGACCTCTG CGGCACTATG
AAGCTCGGCT CGCTGTGCGC CCTCGGCGGC TTCACGCCCT ATCCTGTGCT ATCAGCGCTG
AAACACTTCC GTGAGGACTT CGGACCTCAG CAGCCGCGCC TGCAGGCTGC GGAATAG
|
|---|
| Protein sequence | MSVRLFVPCD AGALAVGADE VAQALHKAAL ERGAEVEIVR NGSRGLYWLE PLVELETAQG
RFGFGPVTAD DAPSLLDAII ADKPHKLSLG LTEEIPWLKR QTRLTFARCG IVDPLSLDDY
RAHGGYKGLT RALTLTPDAV IAEVTTSGLR GRGGAGFPTG IKWKTVSQTA ADRKYVICNA
DEGDSGTFAD RMLMEGDPFV LIEGMTICGI AVGATKGYIY TRSEYPHAIA TMAKAIEIAK
KAGLLGDKIA GSNYTFDLEV RTGAGAYVCG EETALMESLE GKRGVVRAKP PLPAHHGLFG
KPTVVNNLLS FAAIPFILDE GAKAYADFGM GRSRGTMPIQ IAGNVKFGGL FETAFGITLG
ELVDDIGGGT FTGRPVRAVQ VGGPLGAYFP RALFDTPFDY EAFAAKDGLI GHGGIVVFDD
TVDMSKQARF AMEFCAIESC GKCTPCRIGS TRGAETIDKI RRGERVAENI ALVEDLCGTM
KLGSLCALGG FTPYPVLSAL KHFREDFGPQ QPRLQAAE
|
|---|
| |