| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3080 |
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| Symbol | |
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| ID | 5153948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3222184 |
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| End bp | 3224535 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640557950 |
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| Product | bacteriophytochrome |
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| Protein accession | YP_001239104 |
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| Protein GI | 148254519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACTGA TGGCAGCGAT GGATCCGATC TTCGACGGCA CGGCGAACGC TCCCATCTCC
TGCGTCAGCG AAGCGGATCT GACGCTCTGC GACCGCGAGC CGATCCGCAC ACCAGGTGCA
ATCCAGCCCC ACGGCCTGCT GCTCGGGCTC GATCCTGAAG AGCTCCGGAT CACACATGCC
GGCGGTGATG TGGCCGGCCT GCTGACGGCG GCGCCACAGA CGCTGCTGGG AGACAGCGCT
TCGCGGCTGT TCTCGCCTGA CCAGATGAGA CAGTTGCGCA TGCTCGCTGG CGGCGCCGGC
CCGCAACGCG CGGTGCATGC CTTCAGCATG GCCGGACATT CCGAGGCGAA CGCCGACGTG
ATCGCCTTTC GCAGCGGCGC GGTGCTCGTG GTCGAAATCG AGCTCCGACG CGAGCAAGCG
CCGGACAATC CGCTTGCGGC CGTCAAGGGC ATGCTGCGCA ACATCCAGCA GACGGAGACG
GCGCCGTCGT TCTGTCAGGC CGTGGTCGAT GAGGTCCGCC ACCTCATCGG CTTCGACCGG
GTGATGTTCT ATCGTTTCCT GGACGATGGC AGCGGCGCCG TCATCGCCGA GGCCGCGGCG
CCGGACGTCG AGTCCTTTCT TGGCCTGCAT TATCCGGCTT CCGATATTCC AAAGCAGGCG
CGCGAGCTCT ACCGCACCAA CTGGATTCGC GCGATCCCGG ATGCGCGCTA TGCGCCGGCG
CCGATCCTGT CGCTCGGCGA CGCGCCACCG GCCGCCGCGC TCGATCTCAG CCAGAGCACG
CTGCGCAGCG TCTCGCCGAT CCACCGCCAA TACCTCGCCA ATATGGGCGT GGTGGCATCG
ATGTCGATGT CGATCATCAT GCGTGGCCGG CTATGGGGCC TGATCGCCTG CCACCACCGC
GAACCGCGCT ATCTGCCCTA CGGCTTGCGC GAGGCCTGTG AGTTGTTCGC CGAGATGGTG
TCCTCGCATC TGGAAGCCCG GCTCGCCGCC GAGAGCTTCG AACTGCAGAA GCGCAGCGCG
AAGATCCATG AAGAGCTGCT CAACCGGCTG AGCCGGGAAT CCGAGCTCGC GGCTGGCCTG
GTCCGGTTTC GGCCCAATCT GCTCGATCTC ATTCCGGCCG GCGGCGTCGG CCTGTGGATC
GACGGGCAGT TCACCAATAT CGGAGCGACG CCGGATCGCG AGGCGACCGA GGCGATTGTC
GGTTGGCTGA ACGCGACCGT CAAAGAGGGC GTGTTTCAGA CCGACTGCCT CGCCCTGCTC
TATCCGCCCG CCGAACATTT CGCCGATGTC GCCAGCGGGT TGCTGGCGTT GTCGGTGTCC
AAGAGTCCGC GCGACTATGT GCTGTGGTTT CGTCCCGAGC TGGTGCAGAC GGTCAATTGG
GCGGGCAAGC CGGCCAAGCC GGCGCAAGGC GGGTCGGACC ATGAGATGCT GACGCCGCGG
ACCAGCTTCG CGATGTGGCA GGAGCTGGTT CGATTGCACG CCTCGCCCTG GCTCGCGGCG
GAGGTCGAAG CGGCGCACCG GCTCAGGGTG GCGCTGCTCG AGGTGGTGCT GCGGCGCATC
GACCAGCTCG CGCGCGAGCG CGAAGCCGCC CGGCAGAGGC AGGAGCGGCT GACGAGCGAG
CTCAACGAGC GGCTGGCGCA ATCGGAGCGG CTCGCCCGTG CGCTGCGCAA GGAGACCGAG
CTGCGCGCCG CCGTCGAGGG CGACCTCACC CAGGTGCTCC GCCGCACAGT GGCGGATCAG
GAGACCGAGC GGCAGCGCAT CGCCCGCGAG CTGCACGATA CGCTGGGCCA GTCGCTGACG
ATGCTGCAGC TCGGATTGCA GGCGATCGGC CATGAGATCG CCGGCGGGCC AAAGCTGCAG
CAGCGGTTCG ACGGCATCAA GACTATCGCG GACAGCCTCG GGCGCGACGT CCACCGCATC
GCCACCGAGA TCCGCCCGAG CGCAATCGAC GATCTGGGGC TGCAGAAGGC GATCGAGAGC
CTGCTGGAAA CCTGGAGCGA GAACGCCGCC CTCAACTACT ATCTGCATCT GTCGCCCAAG
GACATGCGAT TGCCGAAGGC CATCGAGGCC ACGCTCTACA GGGTCCTGCA GGAGACCCTG
ACCAACGTGG TCAGGCATGC CGAGGCCCGC AAGGTCGGCG TGATCCTCAA CGTCACCGAT
CGCGAGGTGA GCATGATCGT GGAAGATGAC GGCCGCGGCT TTCCTGCCGA TGCGGACGAC
CCCACGGCCA GTCCGGCGAT GCGGCTCGGA CTGCTCGGCA TCCGGGAACG GCTGGCGCTG
GTCGGCGGCT CGCTGGAAAT CGAATCCTCG CCGGGACGCG GCACCACCGT CTTTGCCAGG
GTGCCGCTCT GA
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| Protein sequence | MTLMAAMDPI FDGTANAPIS CVSEADLTLC DREPIRTPGA IQPHGLLLGL DPEELRITHA
GGDVAGLLTA APQTLLGDSA SRLFSPDQMR QLRMLAGGAG PQRAVHAFSM AGHSEANADV
IAFRSGAVLV VEIELRREQA PDNPLAAVKG MLRNIQQTET APSFCQAVVD EVRHLIGFDR
VMFYRFLDDG SGAVIAEAAA PDVESFLGLH YPASDIPKQA RELYRTNWIR AIPDARYAPA
PILSLGDAPP AAALDLSQST LRSVSPIHRQ YLANMGVVAS MSMSIIMRGR LWGLIACHHR
EPRYLPYGLR EACELFAEMV SSHLEARLAA ESFELQKRSA KIHEELLNRL SRESELAAGL
VRFRPNLLDL IPAGGVGLWI DGQFTNIGAT PDREATEAIV GWLNATVKEG VFQTDCLALL
YPPAEHFADV ASGLLALSVS KSPRDYVLWF RPELVQTVNW AGKPAKPAQG GSDHEMLTPR
TSFAMWQELV RLHASPWLAA EVEAAHRLRV ALLEVVLRRI DQLAREREAA RQRQERLTSE
LNERLAQSER LARALRKETE LRAAVEGDLT QVLRRTVADQ ETERQRIARE LHDTLGQSLT
MLQLGLQAIG HEIAGGPKLQ QRFDGIKTIA DSLGRDVHRI ATEIRPSAID DLGLQKAIES
LLETWSENAA LNYYLHLSPK DMRLPKAIEA TLYRVLQETL TNVVRHAEAR KVGVILNVTD
REVSMIVEDD GRGFPADADD PTASPAMRLG LLGIRERLAL VGGSLEIESS PGRGTTVFAR
VPL
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