| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3074 |
|---|
| Symbol | cycL |
|---|
| ID | 5155838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3215851 |
|---|
| End bp | 3216339 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640557945 |
|---|
| Product | cytochrome c-type biogenesis protein cycL precursor |
|---|
| Protein accession | YP_001239099 |
|---|
| Protein GI | 148254514 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.180458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAATC GTCTCCGTCT GGCCTGCCTC GCGCTGCTGC TGCTTGCCGC CCCGGTGGCG
CATGCCGTGC AGCCCGACGA GGTCATGGCC GACACCGCCA AGGAGCAGCG CGCCCGCGCG
CTGTCGCGCG ACCTGCGCTG CATGGTCTGC CAGAACCAGT CGATCGACGA TTCCGATGCG
CCGCTGGCGC GCGACCTGCG CCTTTTGGTG CGCGAGCGTC TCGCCGCCGG TGACAGTGAC
AATCAGGTGC TGGATTTCCT GGTCGCCCGC TACGGCCAGT TCGTGCTGCT GAAGCCGCGC
TTCGAGCGCC AGACCCTGCT GCTGTGGCTG CTGCCGCCGC TGCTGCTGCT CGGTGGCGGC
CTCGCGCTAT GGCTGCAGGT CCGCCGCCGC AGCCAGCGCG GCGTCGAGAC CGCGCCGAAG
CTGACGGCGG AGGAGGAGAC GCGCCTCGCC GCCCTGATGG CAGCGGAGCA GCAGCCGCCG
GCGTCGTAA
|
|---|
| Protein sequence | MRNRLRLACL ALLLLAAPVA HAVQPDEVMA DTAKEQRARA LSRDLRCMVC QNQSIDDSDA
PLARDLRLLV RERLAAGDSD NQVLDFLVAR YGQFVLLKPR FERQTLLLWL LPPLLLLGGG
LALWLQVRRR SQRGVETAPK LTAEEETRLA ALMAAEQQPP AS
|
|---|
| |