Gene BBta_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3072 
SymbolcycJ 
ID5155836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3213357 
End bp3213869 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID640557943 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_001239097 
Protein GI148254512 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA AGCAGAGGCG TTTGACGATC ATCGGTGGGG CGCTGTTCGT GCTCGCGGTC 
GCAGCCGGGC TGGTGCTGAA TGCGCTGCGC GATTCCATCG TGTTCTTCTC GACGCCGACC
ATGGTGGCCG AGAAGCACAT CGGCCCGGGC AAGCGCTTCC GGCTCGGCGG CCTGGTCCAA
CCTGGCTCGC TGAAGCGTGG CGACGATCTC GCGGTGACGT TCGAGGTTGC GGATGGCGGC
GCCAAGCTGC CGGTCGCCTA TAAGGGCATC CTGCCGGATC TGTTCCGCGA AGGGCAGGGC
GTCGTCGCCG AGGGCGCGCT CGATGCCGCC GGTGTGTTCA AGGCCGACAC CGTGCTTGCC
AAGCATGACG AGACCTACAT GCCGAAGGAA GTCGCCGACA CGCTGAAGAA GCAGGGCCAT
TGGAAGGACG ATTACGGCAA GCCGCAAGCG GCGAAGCCGG GCCCGGTGTC GATGCGCGAG
GGCGAGAAGA CGGCGGCAGG AGCGACCCAG TGA
 
Protein sequence
MTRKQRRLTI IGGALFVLAV AAGLVLNALR DSIVFFSTPT MVAEKHIGPG KRFRLGGLVQ 
PGSLKRGDDL AVTFEVADGG AKLPVAYKGI LPDLFREGQG VVAEGALDAA GVFKADTVLA
KHDETYMPKE VADTLKKQGH WKDDYGKPQA AKPGPVSMRE GEKTAAGATQ