| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3063 |
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| Symbol | |
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| ID | 5155970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3203017 |
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| End bp | 3204513 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640557934 |
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| Product | porin precursor domain-containing protein |
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| Protein accession | YP_001239088 |
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| Protein GI | 148254503 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.033522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA TGAGGGGCCT GCTCCTGGCA ACAGGAGCAG CGTTATTGTC CACCGCAGCC
GCTCAGGCCG CGGACCTTCC GCTGAAGGCG AAGGCCGTTG AGTATGTGAA GGTGTGCTCG
CTCTACGGCA CGGGGTTCTA CTACATCCCC GGCACCGACA CCTGCATCAA GCTCGGCGGC
TATCTGCGCG CCGAGACCGC GCTGTGGACC AACAGCAATT ATGGCGGCGC CTATTCGGGC
CAGGCCGGTG CCGACAATCG CCTCAGCAAT CGCTACCAGA TGCGCTCGCG CGAAAACCTC
AACATCGACA CGCGGACCGC GACCGAATAT GGCGTGGTAC GGACCTACTT CGAGACGGTG
ATGAACTGGA CCTCCGGGTC CTATGCCGGC GCGGGGGCCG GCGCAACGTC CTATACGGGC
GACGCCATAT CCGGCGGCAG CATCGGCGTC TACTACGCCT TCATCCAGTT CGCGGGCTTC
ACGATGGGCA AGGCGGTGTC GACCTTCGAC GCCCCCTGGA CCAACTATCC CGGCAATAAT
TTCGACGGTC TGGTCGGCGG CAGCGGCTCC AATAACGGCG TCAATCAGTT CACCTATACG
GCCGATTTCG GTCAGGGCAT CTCGGCCGCA GTGTCGCTGG AAGATCAGAC GCAGTTCTTC
ACCACGAACA TCTGGAACAC GTCGGGGATC ACTGCAGCCG GAGTGCTCGG TGGCAGCTAT
GGCGCGAGCG CCTTCGGCGG CACGGTGGCT CCTGACATCA TCGGCATGGT TCGCATCGAC
CAGGCCTGGG GTCTCTTCCA GGCGTCGTTC GCAGCGCATG ACAATCATGC CGCCTACTAC
GGCGCGGCCG AGACCTCGGG CCATCCGTCC GACAAATGGG GCTGGGCCGC GCAGCTGTCG
CTGTCGGTCA AGAACATTCC GACCGGCGCT GGCGACGTCC TCAACCTGCA GGCAGTCTAT
ACCGATGGCG CAAGCCGCTA CAATTTCCAG AGCCTGGCCA GTACATCCTA TTCGATGTAC
GGCAGCACCG GCGTGACCGG CGCCTATCAA AGCATCGGCT TCGCCGGCGT CGGCGACGCG
GTGTTCGGGA CCGGCACCGG GCTCTCGACC GTGCAGACCT GGGGCATGCG CGGCGCGTTC
ACCCACAACT GGAATCCGAA CTGGAATTCG GCTCTCTACG GCGCCTATGC GCAGGTCCGC
TACGGTCAGA CCGGCGCGAG CCTGATCTGC GCCGGCATCG CCGCGACCGG CATGCTCACC
GCGGGCTCGA CCTGCAACCC CGATTTCAAT CTCGGGCAGA TCGGCCTGAT CACGCGCTGG
ACGCCGGTCA AGAACCTGAC CTTCTCGGCC GACGTGACCT ACAGCCACCT CGACCAGAAG
TACTCCGGGA CGGCCATCGC CCCGGCTGTC GCGAGCACGG CCAAGCCGGC CGCGATCTAC
CAGCTGAAGG ACCAGGACAC GGTAAGCATG CTGCTGCGCG CTCAGCGCAA CTGGTGA
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| Protein sequence | MKTMRGLLLA TGAALLSTAA AQAADLPLKA KAVEYVKVCS LYGTGFYYIP GTDTCIKLGG
YLRAETALWT NSNYGGAYSG QAGADNRLSN RYQMRSRENL NIDTRTATEY GVVRTYFETV
MNWTSGSYAG AGAGATSYTG DAISGGSIGV YYAFIQFAGF TMGKAVSTFD APWTNYPGNN
FDGLVGGSGS NNGVNQFTYT ADFGQGISAA VSLEDQTQFF TTNIWNTSGI TAAGVLGGSY
GASAFGGTVA PDIIGMVRID QAWGLFQASF AAHDNHAAYY GAAETSGHPS DKWGWAAQLS
LSVKNIPTGA GDVLNLQAVY TDGASRYNFQ SLASTSYSMY GSTGVTGAYQ SIGFAGVGDA
VFGTGTGLST VQTWGMRGAF THNWNPNWNS ALYGAYAQVR YGQTGASLIC AGIAATGMLT
AGSTCNPDFN LGQIGLITRW TPVKNLTFSA DVTYSHLDQK YSGTAIAPAV ASTAKPAAIY
QLKDQDTVSM LLRAQRNW
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