| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3062 |
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| Symbol | |
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| ID | 5149443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3200745 |
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| End bp | 3202202 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640557933 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001239087 |
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| Protein GI | 148254502 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTCAC GCCGGTCGCG GGCGTTGCGC CCCGAAGTGT TCAGCGGCTT CAGCCGGGTC
GAGCTGCGCT GCAATTCGCG CACGCTGTTG GCGACGCTCC TGATTACCGA CGATGATGCC
CTGGTCGGGC CGGACGAGAT CGGGCTGTCG CAACCGGCGC TGCGGCGCTT CGCCGAGCCG
GCCGGCACAT TCGCGACCGT CTCGCCGGCG ACCCCGCCTG ACAGTCTGGA GGCGGTGCGC
GCCAAGATCC GCGGCGAGAC ATTGAGCGAC CAGGCGATCT CGGCCGTCAT CGACGACCTC
GCTCACTACC GCTATTCGGA CATGGAGATT GCGGCCTTCC TTATTGGCTC GGCCAGCTTC
ATGACATCGG GCGAACTGCT GGCCCTGACG CGCGCCATGG CCAATGCCGG CACCCAGCTG
AAATGGCCCG AGCCCGTGGT CGTCGACAAG CACTGCATCG GCGGCATCCC CGGTAACCGC
ACCTCGATGG TGGTGGTGCC GATCGTCGCC GCCCACGGCC TGACCATTCC GAAGACGTCC
TCCCGCGCGA TCACCTCCCC GGCCGGCACC GCTGATACGA TGGAGGTGCT GGCACGGGTC
AATGTCGGCG CCGAGGAGAT GAAATCCATC GTCGCCGCCT GCAATGGCTG CGTGATCTGG
GGCGGCCACG TGAATCTGTC GCCGGCCGAC GACATCCTGA TTTCGGTGGA GCGTCCGCTC
AGCCTCGACA CCCGCGAGCA GATGGTGGCC TCGATCCTGT CGAAGAAGCT CGCGGCCGGC
TCCACGCATC TGCTGCTCGA TTTGCCGGTC GGCCCGACCG CCAAGCTCAG CAGCGGCGCG
GAGGCGATGC GCCTGCGCAA GCTGTTCGAG TTCGTCGGCG ATCGCTTCGG CCTCAACGTC
GAGGTGATCA CGACCGACGG CCGCCAACCG ATCGGCAATG GCATCGGCCC GGTGCTGGAA
GCGCGCGATG TGATGGCGGT GCTCGGCAAT GAGCCGGGCG CGCCAGCGGA TTTGCGCGAG
AAGTCGCTGC GGCTGGCAGC GCATCTCCTC GAATATGATC CGAAGCTGCG CGGCGGCGCC
GGCTATCAAC GGGCGCGGGA GTTGCTCGAC AGCGGCGCGG CGCTGAAGCA GATGCAAAAG
ATCATCGATG CCCAGGGGCC GACAACGAGC CGGAACGAAC TCGGCGACCT CGCCTTCGAC
GTCAAGGCCG GTCGCGACGG CATCGTGTCG GCGATCGACT GTCTGCGGCT CAATCGCCTG
GCGCGCACCG CCGGCGCACC GATCAACAAG GGCGCCGGAA TCAGGCTGTT CAAGAAGATC
GGCGACCGGG TCGACCAGGG TGAGCCACTT TACCGCGTGT TCACCTGCGA CCCGTCCGAG
CATGATCTGG CGGTGGCGGC AGCCGCGGCC GACCATGGTT ACGGCTTCGC CGACGAACCG
AACGGCCATC AGCGATGA
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| Protein sequence | MISRRSRALR PEVFSGFSRV ELRCNSRTLL ATLLITDDDA LVGPDEIGLS QPALRRFAEP
AGTFATVSPA TPPDSLEAVR AKIRGETLSD QAISAVIDDL AHYRYSDMEI AAFLIGSASF
MTSGELLALT RAMANAGTQL KWPEPVVVDK HCIGGIPGNR TSMVVVPIVA AHGLTIPKTS
SRAITSPAGT ADTMEVLARV NVGAEEMKSI VAACNGCVIW GGHVNLSPAD DILISVERPL
SLDTREQMVA SILSKKLAAG STHLLLDLPV GPTAKLSSGA EAMRLRKLFE FVGDRFGLNV
EVITTDGRQP IGNGIGPVLE ARDVMAVLGN EPGAPADLRE KSLRLAAHLL EYDPKLRGGA
GYQRARELLD SGAALKQMQK IIDAQGPTTS RNELGDLAFD VKAGRDGIVS AIDCLRLNRL
ARTAGAPINK GAGIRLFKKI GDRVDQGEPL YRVFTCDPSE HDLAVAAAAA DHGYGFADEP
NGHQR
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