| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3058 |
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| Symbol | |
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| ID | 5149439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3193169 |
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| End bp | 3194752 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640557929 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_001239083 |
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| Protein GI | 148254498 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0549474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT TTGATCGGCA GAGCCATTAT CCGGCTGCGT CCCAATCCTT GCCCGAAGAG
ATTGCGGCCG AGCTGGCGGC CATTCCGCCG CAGGTGCAGG CGGTCGAGGA CGCCCCGCCG
ATCGCGCCGC CGGTGCCGCT GACCCAGACC GAGGTCCGCA CGATTCTGAT GAGCCTGCTG
CTGACGATGT TCCTGGCCGC GCTCGACCAG ACGATCGTCG CGACGGCGCT GCCGACCATC
GGCCGCGAGT TCCAGGACGT CACCAATCTC TCATGGGTGA TCACCGCCTA TCTGCTGGCC
TCGACCGCGG TGGCGCCGGT GTTCGGCACG CTCTGCGACA TCTATGGCCG CCGCGCCATG
ATCATCACGG CGCTCAGCCT GTTCGTCGTC GGCTCTGTGG TCTGCGCGCT GGCGCCGAAC
ATGCCGGTCT TGATCCTCGC CCGCGGCCTG CAGGGGCTCG GCGGCGGCGG CATCATGCCG
GTGGTCCAGA CGGTGATCTC GGACGTGGTC AGCCCCCGCG AGCGCGGTCA GTACCAGGCC
TATTTCAGTG GTGTCTGGCT GCTCGCCGGC CTGCTCGGGC CGGTTATCGG CGGCTTCTTC
GCCGACCACC TGCACTGGTC GATGATCTTC TGGATCAACG TCCCGCTCGC GATTGCCGCG
CTGGCACTGC TGTTGCCCAA GATGGCCCGG CTGCCGGTCT ATCACCGGCT GCGCAAGGTC
GACTGGGCCG GCGGCCTGCT GCTGATGGCC TCGGCCGTCG TGTTCATGCT GGTCCTGACC
TGGGGCGGCC ACCGGCTGGC CTGGTTGTCG CCGACCATTT TGGCGATGAT CGGCAGCGCC
GTTGCGCTCG GCCTCGGCTT CGTCTGGCAC GCCAAGCGGG CCGATGAGCC GTTCCTGCCG
CTGTCGCTGA TGGGCGGCAC GGTGGTGCCT TATGGCATGC TGGCGAGCGG CTGCGCGCTC
GGCGCGCTGA TCGGGCTGAC CGTGCACCTG CCGCTGTATT ACGAGCTGGT CTATCATCTG
ACGCCGAGCC AGGCCGGTCT TGGCCTGATT CCGATCGCTG CGATCTCGAC CTTCGGGGCG
GCCATCGCCG GCCGCACCAT GGCCCGGGTC AAGCACTACA AGCGCGTCGC CATCCTCGGC
ACCTTCATCG GCACCATCGC GGCCGCGGTC ATGACGGTGA CCACGCCGTC GCTGTGGGTC
CTGCTGGTGC TGCTGTCGGT TTGCGGCATC GGGCTCGGCA CGGCGTTCCC GATTTCGGTG
GTGTCGCTGC AGAACGCCGT GGCGCGGTCG CAGATCGGCA CCATCACCGG CGCCATGAAC
TTCTTCCGCT CGATGATGTC GTCGTTCACC GTCGCGGCTT TCAGCGCCAT CCTGCTGATG
GTGCTCGGCG CAGACATCTC GCTGGCGGAG GGGGCGCATG GCGCGGTCAG CGGCATCGCG
GAAGCCGACA TGATCTATGC CTTCCGCTTC GTGTTTGCGG CCGCCACCGT GATGCTCGCC
TGCGCCTCCG TCTGCATGAT CCTGATGGAG GAGCGGCCGC TGGCCGGCCC GTCGCGCACC
GAGCCGGTGG ATATGGCGGA GTAA
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| Protein sequence | MNKFDRQSHY PAASQSLPEE IAAELAAIPP QVQAVEDAPP IAPPVPLTQT EVRTILMSLL
LTMFLAALDQ TIVATALPTI GREFQDVTNL SWVITAYLLA STAVAPVFGT LCDIYGRRAM
IITALSLFVV GSVVCALAPN MPVLILARGL QGLGGGGIMP VVQTVISDVV SPRERGQYQA
YFSGVWLLAG LLGPVIGGFF ADHLHWSMIF WINVPLAIAA LALLLPKMAR LPVYHRLRKV
DWAGGLLLMA SAVVFMLVLT WGGHRLAWLS PTILAMIGSA VALGLGFVWH AKRADEPFLP
LSLMGGTVVP YGMLASGCAL GALIGLTVHL PLYYELVYHL TPSQAGLGLI PIAAISTFGA
AIAGRTMARV KHYKRVAILG TFIGTIAAAV MTVTTPSLWV LLVLLSVCGI GLGTAFPISV
VSLQNAVARS QIGTITGAMN FFRSMMSSFT VAAFSAILLM VLGADISLAE GAHGAVSGIA
EADMIYAFRF VFAAATVMLA CASVCMILME ERPLAGPSRT EPVDMAE
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