Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3056 |
Symbol | |
ID | 5149437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3189869 |
End bp | 3192148 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640557927 |
Product | putative penicillin-binding protein |
Protein accession | YP_001239081 |
Protein GI | 148254496 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCAGA TCATTCCAGA CGAATGGAAG AAGCGGATCA ACAATTTCCG CCTGGATCTC GACGCCCGGT TCGATTCGGC GTTGTTCTCC TCGCTGCGCG GCACCCGCGA GCTGTATGAG CGCTATTCGG CGTTCATGGA CCGCTTCTAC GTCGGCGGCT GGAAGCGCTG GGTGTTCGTC GAGCCGCTGT CGGAGGCTGC AACGATCGGC CTCGGCGGCC TGGTCCTGAT GTTGGCGCTC GCGATCCCCG CGTTCCGGGA AACGGCGGAC GAGGACTGGC TGAAGAAGTC CGACCTCGCG GTCACCTTCC TCGACCGCTA CGGCAACCCG ATCGGCAGCC GCGGCATCAA GCACAACGAC TCGATCCCGC TGGAGGACTT CCCGGATAAT CTGATCAAGG CGACGCTCGC CACCGAGGAC CGCCGCTTCT ACGACCATTT CGGCATCGAC TTCCCCGGCC TCGCGCGCGC GCTCGTCACC AACGCCCAGG CCGGCGGCGT CCGCCAGGGC GGCTCCTCGA TCAGCCAGCA GCTCGCCAAG AACCTGTTCC TGTCCAACGA GCGCACCATC GAGCGCAAGG TCAACGAGGC GTTCCTGGCG ATCTGGCTCG AGACCCGCCT GACCAAGAAC GAGATCCTCA AGCTCTATCT CGATCGCGCC TATATGGGCG GCGGCACCTT CGGCGTCGAC GGCGCGGCGC ATTTCTACTT CAACAAGTCG GTGCGCGACA TCAACCTGGC CGAGGCCGCG ATGCTGGCCG GCCTGTTCAA GGCGCCGACC AAATTCGCGC CGCACATCAA CCTGCCCGCC GCCCGTGCCC GCGCCAATGT GGTGCTCGAC AATCTCGTCG ATGCCGGCTT CATGACCGAG GGCCAGGTGT TCGGCGCCCG CCGCAACCCG GCCTTTGCGG TCGACCGCCG CGACGAAAGC TCGCCCAACT ACTTCCTCGA CTATGCCTTC GACGAGATGC GCAAGCTGGT CGACACGTTC CCGAAATCCT ACACCGAGCG CGTGTTCGTG GTGCGGACTT CGATCGACAT GAACGTGCAG CATGCTGCCG ACGAGGCGAT CGAGAACCAG CTGCGCCAGT TCGGCCGCGA CTACCATGCC ACCCAGGCCG CCACCGTGGT CTCAGACCTC GACGGTGGCA TCCGCGCCAT GGTCGGCGGC CGCGACTACG GCGCCAGCCA GTTCAACCGC GCCACCGACG CCTATCGGCA GCCGGGCTCG TCGTTCAAGC CGTACGTGTA CACGACGGCG CTGCTCAACG GCTACAAGCC GACCTCGACC ATTGTCGACG GCCCGGTCTG CATCGGCAAT TGGTGTCCGC AGAACTATGG CCATTCCTAT TCCGGCACGG TGACGCTGAC GCAGGCGATT ACCCGCTCGA TCAACGTCGT TCCGGTGAAG CTGTCGATCG CGCTCGGCGG CAAGGAGGGC CCGAAGGCGG GCCGCGCCAA GATCGTCGAG GTCGCCCGCC GCTTCGGCAT CAAGGCGCCG CTGCCGGACA CGCCGTCGAT GCCGATCGGC TCCGACGAGG TTACGGTGCT GGAGCACGCT GTCGCCTATG CGACCTTCCC GAACAAGGGC AAGGCCGTCA CGCCGCATTC GGTGCTGGAG GTCCGCACCG GCGCCGGTGA CCTGGTCTGG CGCTGGGACC GCGACGGTCC GAAACCGAAG CAGGCGATCC CGGCCTCGGT GGCCGCCGAC ATGGCGGGCA TGATGAGCCA CGTGGTCAGC GAGGGGACCG CACGCCGCGC CGCACTCGAC GGCATCCCGA CCGCCGGCAA GACCGGCACC ACCAACGCCT ACCGTGATGC TTGGTTCGTG GGCTACACCG GAAACTTCAC CTGCGCCGTC TGGTACGGCA ATGACGACTA TTCGCCGACC AACCGCATGA CCGGCGGCTC GCTGCCGGCG CAGACTTGGC ACGACATCAT GGTCGCCGCG CATCAGGGCG TCGAGGTCAA GGAGCTGCCC GGCGTCGGCA TGGGCGAGAA ACTGCCGCAG CCGGCCTCCG CCGCGATGGC CCAGGCAGGC CAGCCGAAAA CCCTCGAGAT CAAGCCCGGT CCGCCGCCGG TGCTGACCCG CCGTGGCGCC GAGATCCTGG TCCAGGTCGA GAAAATGCTC GACGATGCCG CCCGCGTCGC CGAGAAGGCG GCACCGGTCG ATCCGCGCAA GCCGGCCAAG CCCGTGTCGT CGAGCGCGCT CGCCTTCCCT GAGAACTACG CCGCGGCAAC CGCCGATGGC GTGACCACGC CTGCCTTGCG CAAGAACTGA
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Protein sequence | MRQIIPDEWK KRINNFRLDL DARFDSALFS SLRGTRELYE RYSAFMDRFY VGGWKRWVFV EPLSEAATIG LGGLVLMLAL AIPAFRETAD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND SIPLEDFPDN LIKATLATED RRFYDHFGID FPGLARALVT NAQAGGVRQG GSSISQQLAK NLFLSNERTI ERKVNEAFLA IWLETRLTKN EILKLYLDRA YMGGGTFGVD GAAHFYFNKS VRDINLAEAA MLAGLFKAPT KFAPHINLPA ARARANVVLD NLVDAGFMTE GQVFGARRNP AFAVDRRDES SPNYFLDYAF DEMRKLVDTF PKSYTERVFV VRTSIDMNVQ HAADEAIENQ LRQFGRDYHA TQAATVVSDL DGGIRAMVGG RDYGASQFNR ATDAYRQPGS SFKPYVYTTA LLNGYKPTST IVDGPVCIGN WCPQNYGHSY SGTVTLTQAI TRSINVVPVK LSIALGGKEG PKAGRAKIVE VARRFGIKAP LPDTPSMPIG SDEVTVLEHA VAYATFPNKG KAVTPHSVLE VRTGAGDLVW RWDRDGPKPK QAIPASVAAD MAGMMSHVVS EGTARRAALD GIPTAGKTGT TNAYRDAWFV GYTGNFTCAV WYGNDDYSPT NRMTGGSLPA QTWHDIMVAA HQGVEVKELP GVGMGEKLPQ PASAAMAQAG QPKTLEIKPG PPPVLTRRGA EILVQVEKML DDAARVAEKA APVDPRKPAK PVSSSALAFP ENYAAATADG VTTPALRKN
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