Gene BBta_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3039 
Symbol 
ID5149858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3174360 
End bp3175793 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content64% 
IMG OID640557911 
Productputative succinate-semialdehyde dehydrogenase 
Protein accessionYP_001239065 
Protein GI148254480 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGTGC AGCGGGCGAG AGGGGTCCAC GGAGTACGAT CAATGACCTA CCAGACCATC 
AATCCATATA CGGGGGAAAC CCTCGCTTCC TTTCCGGATG CGACCGACGA CGAGGTGCGT
GCGGCGATCG CCGCCGCGCA TGAGGCGTTT CTCGCCTGGC AGCAGACGTC CTTCGCCGAA
CGCGGCCGGA TTCTGCAGAC GGCCGCCGAC ATCCTGCGCC GGGACAGCGA CTCCTATGCG
CGGCTGCTGA CGCTGGAGAT GGGCAAGCTG TTCAGCGAAG CCAAGGCCGA GGTCGAACTG
TCGGCAAAGA TCCTCGAATA TTACACCCGC CACGCCGAGG CGCTGCTGGC GCCGGAAAAG
CTGCCGGTTC TGGATCCGGC CGAAGGCGAG GCCATTCTCG TCTGTGAGCC GCTTGGCGTT
CTGCTGGCCA TCGAGCCGTG GAATTTCCCA TATTATCAGA TCGCACGCAT CCTGGCGCCG
CAGCTGTCGG CCGGCAACAC GCTGCTCCTC AAGCATGCCT CGAATGTCCC GCAGTCGGCG
GCGGCCTTCG AGAAGCTGAT GGCCGAGGCC GGTCTGCCCC GCGGCGCGTT CAAGAATCTC
TATGCCACGC GGTCCCAGGT CGAGCTCATT CTCAACGACG ACCGGGTTCA CGGCGTGGCG
CTCACCGGCT CCGAAGGGGC AGGCTCGGTG GTGGCTGCGC AAGCCGGCAA GGCGCTGAAG
AAATCGACGA TGGAGCTCGG CGGTGCCGAT GCCTTCATCG TGCTCGCGGA CGCTGATCTG
GACAAGACCA CCAGATGGGC GGTGTTCGGC CGGCACTGGA ATGGCGGGCA GGTCTGCGTG
TCGTCCAAGC GGATGATCCT GGTCGATCCG ATCTATGACG AGTTTCTCGC CCGCTACCGC
AAGGGCGTTG CGGGTCTTGT CGCCGGCGAC CCGTTCGATC CGAAGACGAC GCTGGCGCCG
CTGTCGTCGC AAGGTGCGGC TGACGAGGTG AAGGAGAAGA TCCGGGCAGC GGTTCAGCTC
GGCGCCAAGG CCGAGGAGGT GGGCCCTCCG GTGCCCAATC GCGGTGCTTT CGTGCAGCCG
ACGATTCTGA CCGAGGTCGC GGACGACAAT CCGGCACGTC ATTGGGAGTT CTTCGGCCCG
GTGTCGATGC TGTTCCGCGC CAAGGACGAA GATGACGCGG TTCGTATCGC CAATGATTCA
CCGTTCGGTC TCGGCGGCTC GGTCTTCACC GCCAACCCGG CGCATGGTGC CGAGCTCGCG
AGAAGGGTCT CGACCGGCAT GGTGTTCGTG AACCATCCGA CCAAGGTCGA GGCTGATCTG
CCGTTCGGAG GCATCCGCCG CTCGGGCTAT GGTCGTGAGC TGATCGGACT CGGCCTGAAG
GAGTTCGTCA ATCACAAGCT GATCGACATC GTGGACATCG ATGCGCGGTT CTAA
 
Protein sequence
MHVQRARGVH GVRSMTYQTI NPYTGETLAS FPDATDDEVR AAIAAAHEAF LAWQQTSFAE 
RGRILQTAAD ILRRDSDSYA RLLTLEMGKL FSEAKAEVEL SAKILEYYTR HAEALLAPEK
LPVLDPAEGE AILVCEPLGV LLAIEPWNFP YYQIARILAP QLSAGNTLLL KHASNVPQSA
AAFEKLMAEA GLPRGAFKNL YATRSQVELI LNDDRVHGVA LTGSEGAGSV VAAQAGKALK
KSTMELGGAD AFIVLADADL DKTTRWAVFG RHWNGGQVCV SSKRMILVDP IYDEFLARYR
KGVAGLVAGD PFDPKTTLAP LSSQGAADEV KEKIRAAVQL GAKAEEVGPP VPNRGAFVQP
TILTEVADDN PARHWEFFGP VSMLFRAKDE DDAVRIANDS PFGLGGSVFT ANPAHGAELA
RRVSTGMVFV NHPTKVEADL PFGGIRRSGY GRELIGLGLK EFVNHKLIDI VDIDARF