Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3032 |
Symbol | degP |
ID | 5156163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3168096 |
End bp | 3169193 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640557904 |
Product | Serine protease do-like precursor |
Protein accession | YP_001239058 |
Protein GI | 148254473 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.722688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTC TGCGTTGTGT CCGGCCTTTG GTTCTGCTGC CGGCGATCGT GCTCTCCCTC CTGGCTGCCC CTGCCCTCGC CCAGATCCCG GACCTCAAGC TCGGCCGCGT GCCGACCTTG GCGCCACTGG TCAAGGAGGT CACCCCGGCC GTCGTCAACA TCTCGGTCGA AGGCAAGGTC CGGCAGGACA ATCCGCTGTA CCAGGACCCG CTGTTCCGCG AGTTCTTCGA CGTTCCGAAA CAGGTCGAGA AGCAGATCAG CGCCACCGGC TCCGGCGTCA TCGTCGATGC GCAGCGCGGC TACGTGATGA CCGCCAATCA CGTCGTCGAG CATGTCAGCA CCGCACAAAT CCGGACCAAG GACGGCCGCA AATTCTCCGC CCGCCTGGTC GGGCGCGATC CCGCCACCGA CATCGCGGTG CTGCAGATCA AGGATCCGAC CGAGCTCAAG GCGATCGCGC TTGGCGACAG CGATGCGCTC GAGGTCGGCG ACTTCGTGAT CGCGGTCGGC AACCCGTTCG GCCTCGGACA GACCGTCACC TCCGGCCTCG TCAGCGCGCT CGGGCGAACC GGGCTCGGCA AGCAGGGCTA TGAGGATTTC ATCCAGACCG ACGCCGCGAT CAATCCCGGC AATTCAGGCG GGGCGCTGAT CAACCTCCGC GGCGAACTGG TCGGCATCAA CACCGCGATC ATCTCGCCGG GCGGCGGCAA TGTCGGCATC GGCTTTGCCG TGCCGATCAA CATGGCGCGA CGGGTGATGG AGCAACTGGT CGCCAACGGC CGCGTCGACC GCGGACGCAT CGGGGTCACC CTGCTCGATC TGGATTCGCC GGCCGATGGC CGCGTCCAGG GCGCCCGCGT CGCCGATGTG ACCGTCGGCT CCCCGGCCGA GCGGGCCGGA CTGCGCAAGG GCGACATCAT CGTGAAGGCG AACGACATGC CGGTGCGCAG CGCGACGCAG GTTCGCAATC TCATCGGGCT GACGCCGGTC GGCCAACGCG TCCGCCTCGT GTTCGAGCGC GACCGCGCGC TCGGCAATGC GACGGTCGAG GTCGCGCCGG TTACCGAAGA ACGCGCCCGC GCGCGAAGCT CGGGCTGA
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Protein sequence | MQILRCVRPL VLLPAIVLSL LAAPALAQIP DLKLGRVPTL APLVKEVTPA VVNISVEGKV RQDNPLYQDP LFREFFDVPK QVEKQISATG SGVIVDAQRG YVMTANHVVE HVSTAQIRTK DGRKFSARLV GRDPATDIAV LQIKDPTELK AIALGDSDAL EVGDFVIAVG NPFGLGQTVT SGLVSALGRT GLGKQGYEDF IQTDAAINPG NSGGALINLR GELVGINTAI ISPGGGNVGI GFAVPINMAR RVMEQLVANG RVDRGRIGVT LLDLDSPADG RVQGARVADV TVGSPAERAG LRKGDIIVKA NDMPVRSATQ VRNLIGLTPV GQRVRLVFER DRALGNATVE VAPVTEERAR ARSSG
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