| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3031 |
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| Symbol | |
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| ID | 5156162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3166729 |
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| End bp | 3167946 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640557903 |
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| Product | hypothetical protein |
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| Protein accession | YP_001239057 |
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| Protein GI | 148254472 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.887651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.918064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGGTG ACGGTCTGGC TTTCAGTTTG CCACGCTGGC GCGTGACGCG CTGGCTGGCA
GACCCGGGAT ATCCGGTATC TCCCGACGAT CGCCTCGCCC TGATCGGCGA GCTCTATGGC
TGCTGGTCCG TGTTCGCCGG TGGCGCCATC AACACCGTGG CCGTCGCGGC AGCGCTCGCA
CTGCGCACAC CGACTGCCCT GTTCATCAGC TGGCTTGCCC TGGAGCTCGT GATCTGCCTG
TCTCGGCTGA TCGTGATGAT GATCGCCTAT CGCAGGTCAC GTTACAAGCT CACGACGCCG
ACCGATGTCC ACATCCTGCT CTCGGTGGCC TGGAGCGCCA GCGTCGGTTT CGGTGTCGGC
ATCAGCTTGG CGTCGGGCGA CTGGGTCGCG GCTTCACTCG CCTGCATTTC GTCGGCGGCC
ATGGTCGGCG GCATCTGCTT TCGCAATTTC AGTGCGCCAC GCCTCGTCGG CACGATGATC
CTGTGCAGCA TCGGCCCGGT GCTCCCGGGT GTCGCGATTT CCCATGAACC GCTGCTGTTC
GTGATGTATC TGCAGATGCC GGTGTACTTC GTGGCGATGA CCGGCGCGGC ATTCCGCCTG
AACAAGATGC TCGTCGCGGT CATGCGCGCC AAGACCGAAA GCGATGAGCG GGCGCTGCGC
GATCCGCTCA CGGGCCTGTC CAACCGTGCC GGCCTGATCG AGGCCTTGCA ACGAAAGCTC
GCGGGCAAGG CCGATGCGGA CCAGCGCTTC GCCGTGCTCT ATCTCGATCT CGACGGCTTC
AAGCCGGTGA ACGACACCTT TGGCCATGCG GCGGGCGACG AACTGCTGAA GATCGTCGGC
CGGACGCTGC GGCAGGTCGT GTCTCCGGCC GACCTGATTG CGCGGATCGG GGGCGACGAG
TTCGTCGTGC TGGTCAGCGA TCCGTCGATC GACCACGCCC TGGCGCTCGG CGAACGCATC
ATCGAGATGA TCACTGCGCC GGTGGTGCTG CCGGGCGGCG CGCGCGTGCA TATCGGCATG
AGCATCGGCA TTGCGGCCGC GCCCGAGCAC GGCAGCGATG CCGAGGCTCT GCTGTTTGCC
GCCGACGCCG CGCTTTATGA TGCCAAGTCG AGCGGCAAAT CGTGCTGGAG ACTGGCCTCG
GCAGAGGCCA ATCTCGCAGC CTTGCGCAAA TATGCCGGCA TCGATCAGGT CGCGGCCGAG
AAGCTGACCG CGGCCTGA
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| Protein sequence | MRGDGLAFSL PRWRVTRWLA DPGYPVSPDD RLALIGELYG CWSVFAGGAI NTVAVAAALA
LRTPTALFIS WLALELVICL SRLIVMMIAY RRSRYKLTTP TDVHILLSVA WSASVGFGVG
ISLASGDWVA ASLACISSAA MVGGICFRNF SAPRLVGTMI LCSIGPVLPG VAISHEPLLF
VMYLQMPVYF VAMTGAAFRL NKMLVAVMRA KTESDERALR DPLTGLSNRA GLIEALQRKL
AGKADADQRF AVLYLDLDGF KPVNDTFGHA AGDELLKIVG RTLRQVVSPA DLIARIGGDE
FVVLVSDPSI DHALALGERI IEMITAPVVL PGGARVHIGM SIGIAAAPEH GSDAEALLFA
ADAALYDAKS SGKSCWRLAS AEANLAALRK YAGIDQVAAE KLTAA
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