Gene BBta_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3023 
SymbolmutA 
ID5151001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3158782 
End bp3160647 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content69% 
IMG OID640557896 
Productmethylmalonyl-CoA mutase small subunit (MCM-beta) 
Protein accessionYP_001239050 
Protein GI148254465 
COG category[I] Lipid transport and metabolism 
COG ID[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit 
TIGRFAM ID[TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.577425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG ACACCGAACA GCTGCGATTG GCCGCCGATT TCGCGCCGGC CAGCGAGGCG 
GACTGGCGCA AGCTGGTCGA TGGCGTGTTG AAGGGCGCGG CGTTCGAGAA ACTGGTCGGC
AAGACCTATG ACGGACTCAA GATCCAGCCG ATCTACCCGC GTGCCAAGGA CGCCGCCCCC
GTCGTCGGAC GTGCGCCAGC CGCCGCGTGG CAGATCATGC AGCGCGTCGA TCATCCCGAT
CCGGCCAAGG CCAACGCGCA GGCCCTGCTC GACCTGGAAA ATGGCGCGAC CGGGTTGACG
CTGGTCTTTG CCGGCGCCAA TGCCGCGCAT GGCTTCGGGC TCGCCGCCAC CGCGGACGCG
CTGGCGCGCG CGCTTCAGGG CGTCCATCTC GACGCTGCGA TTGCGATTGA ATTGCAGCTC
GGCGAGTCCT CGATATCGGC AGCCTCGCTG CTGGCCGCCG ACGTCAGACA GCGCGGCTTT
GCGCCGGCGG CTTGCGAGAT CCGCTTCGGC CTCGATCCGA TCGGCGACGC GGCCAGCCGC
GGCGCCAGCG CGCATGATGC AGCGAAGCTC GCCGGCAGCG CCGTCGAACT CGTCAAGCAG
TTGCACGCTG GCGGCTTCAA GGGCCCGTTC CTCGCGGCCG ATGGACGCGT CGTGCATGAT
GCCGGCGGAT CGGAGGCGCA GGAGCTGGCA TTCGTGCTCG CCTCCGCTGT CGCTTATCTG
CGCGCGCTCG AAGCCGGCGG CGTCGCATTG GAGACTGCGC GCGACATGAT CTATGCGCGG
CTCGCCGCCG ACACCGATCA GTTCCTGACG CTGGCGAAGT TCCGCAGCCT GCGCCGGCTG
TGGGCGCGCA TCGAGGCCGC GTGCGGGCTG GCACCCAAGC CGCTCTTCAT CTCCGGCGAG
ACCGCGTGGC GTATGCTCAC CAGGCGCGAT CCCTATGTGA ACATGCTGCG CGCGACCATC
GCGACCTTCG CAGCCGGCCT CGGCGGCGCC AATGCGATCA CGGTTCTGCC GCACACCGCG
GCGCTCGGCC TGCCCGATGC CTTTGCGCGC CGCGTCGCGC GCAATACGCA ATTGGTGCTG
CTCGAAGAGA GCAATCTCGC CCGCGTGGCC GATCCCGCGG CAGGCGCCGG CGGCATCGAG
GCGCTGACAA ACGAGCTGAG CACCGCCGCC TGGACGCTGT TCCAGGAGAT CGAGAAAGCC
GGCGGTGTCG TGGCCGCGCT GCAGGCCGGC TTGATCCAGT CGAAGATCGC CGCGGTGAAA
CAGGCGCGCG ACGCCAATCT CGCCAAGCGT CGCGACGTGC TCACCGGCGC CAGCGAGTTT
CCGAACCTCA ATGAGGCCGA AGTCGCGGTC GACGCGGTCG CACCGCTAGC TCCGCAACCG
GCTGCCAAGG CTGCTCTTAC CTTTGCTGCG CTCGCGCCGA TCCGTCTCGC GGACGCGTTC
GAACGGCTGC GCGACCGCTC TGACGCCCTG CTCAAGAGCA AAGGCCAGCG GCCCGCCATC
TTCCTCGCCA ATCTCGGCAC CGCCGCGGAC TTCACCGCGC GCGCCACTTT CGCCCGCAGC
TTCTTTGAAG CCGGCGGCAT CACAGCGGTC GACGGCCCGG GCGGCGCCGA TCCGGCCGCG
CTCGCCGACG CGTACCGCGC GTCGGGAGCC GCCATCGTCT GCCTCTGCTC GTCGGACAAG
GTCTATGCGG AGACCGCGGT TCCCGTGGCC CAAGCCCTTC AGGCCGCCGG CGCCCGACAT
ATCTATCTGG CAGGCCGCGG CGGCGAGCAG GAGGCTGCGC TGCGCGAGGC CGGAATCGGC
AGCTTCGTGT TCGCCGGCGG CGACGCGCTG AAGACACTCG AAGACGCCTA TACGCATCTG
GAGTGA
 
Protein sequence
MTTDTEQLRL AADFAPASEA DWRKLVDGVL KGAAFEKLVG KTYDGLKIQP IYPRAKDAAP 
VVGRAPAAAW QIMQRVDHPD PAKANAQALL DLENGATGLT LVFAGANAAH GFGLAATADA
LARALQGVHL DAAIAIELQL GESSISAASL LAADVRQRGF APAACEIRFG LDPIGDAASR
GASAHDAAKL AGSAVELVKQ LHAGGFKGPF LAADGRVVHD AGGSEAQELA FVLASAVAYL
RALEAGGVAL ETARDMIYAR LAADTDQFLT LAKFRSLRRL WARIEAACGL APKPLFISGE
TAWRMLTRRD PYVNMLRATI ATFAAGLGGA NAITVLPHTA ALGLPDAFAR RVARNTQLVL
LEESNLARVA DPAAGAGGIE ALTNELSTAA WTLFQEIEKA GGVVAALQAG LIQSKIAAVK
QARDANLAKR RDVLTGASEF PNLNEAEVAV DAVAPLAPQP AAKAALTFAA LAPIRLADAF
ERLRDRSDAL LKSKGQRPAI FLANLGTAAD FTARATFARS FFEAGGITAV DGPGGADPAA
LADAYRASGA AIVCLCSSDK VYAETAVPVA QALQAAGARH IYLAGRGGEQ EAALREAGIG
SFVFAGGDAL KTLEDAYTHL E