Gene BBta_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3018 
Symbol 
ID5151444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3153350 
End bp3154006 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID640557891 
Productputative pyrrolidone-carboxylate peptidase 
Protein accessionYP_001239045 
Protein GI148254460 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.44949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC CGCTTCGCAT CCTGCTGACA GGCTTCGGCC CGTTTCCCGG CGCGCCATCC 
AATCCGACGA TGCCGCTGGT GAAGCGGCTG TCGGCGCTGC GCCGGCCGGC GCTGGACGAT
GTCGAGATCA GCAGCCACAT TTTTCACGTC ACCTACAGCA CCGTCGATCG CGAACTGCCG
GCCCTGATCG CCGAGCGCCG TCCGCATGCG CTGCTGATGT TCGGTCTCGC CGGTCGGACA
TCGTATCTCC GCATCGAGAC CCGCGCTCGC AACGCCGTAA CGACCACCTT CCCCGATGCC
GATCGCCAGA TCGCCCGCAA GGGCGTCATC GTGCCGGGCG CGCATCCGAT GCCGTTCGGC
CCGCACATGG GCCGACTGCT GCGCGCGGCG CGCGCCACCG GCATCGATGC GCGGGCCTCG
CGCGATGCCG GCAGCTATCT CTGCAACTAT CTGAGCTGGC GCGCGATCGA GGCAACGAAG
ACCGCCGATG GTCCGCGCAT CGCGGCGTTC ATCCACATTC CGCCGCTGCC ACGCGCCGGG
ACGGCGCTGC CGCAGGGCAG CCCGCGCATC ACCTTGGAGG CGCTGGTCGA TGCCGGCGAA
GCCATGCTGA TGGAATTGGT CAAGCTCGCG CGACAGGCAT CCAGCCGCGC GAGCTGA
 
Protein sequence
MSEPLRILLT GFGPFPGAPS NPTMPLVKRL SALRRPALDD VEISSHIFHV TYSTVDRELP 
ALIAERRPHA LLMFGLAGRT SYLRIETRAR NAVTTTFPDA DRQIARKGVI VPGAHPMPFG
PHMGRLLRAA RATGIDARAS RDAGSYLCNY LSWRAIEATK TADGPRIAAF IHIPPLPRAG
TALPQGSPRI TLEALVDAGE AMLMELVKLA RQASSRAS