Gene BBta_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3016 
Symbol 
ID5152424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3151377 
End bp3152753 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content67% 
IMG OID640557889 
Producthypothetical protein 
Protein accessionYP_001239043 
Protein GI148254458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.399987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCA ATCGCCGCCG CATTCTGGCC GGATCGGCCG CCGGCGCCGC CGGGGCTTTG 
GCCTTGCCGG TCGATGCCGC ACAGGCCACA CCGCAGATCT CCACGCTCGG CCGCGATGCC
ACGCAATATG GCGTGAAGCC CAACAGTCCC GACGAACAGA CCCGCGCGCT GCAGCGCGCG
ATCGACGAGG CGGCACGGGT CCAGGCACCG CTGGCGCTGC CTCCCGGCAC CTACAGAAGC
TCAATGCTGC GACTCGCCAG GGGCACCCAG CTGATCGGCG TCCGCGGCGC GACGAAGCTC
GTCTTCACCG GCGGCGGCCC GTCGCTGCTC TCAGGCGAAG GCGCTGATGG CGCCGGCATC
GACGGCATCT CGCTCGACGG TGGCAGCATC GCCCTGCCCC AGCGCCGCGG TCTGCTGCAT
CTTGCAGCCG CCCGCGATAT CCGAGTCATC GATTGCGAGA TCGCCCGCTC CGGCGGCAGC
GGCATCTGGC TCGAGCAGGT CTCCGGCGAT GTCAGCGGCA ACCTCCTCAC CGACATCGCG
GTCACCGCGA TCGTGTCATT CGACGCGCTC GGGCTGATCG TGTCGCGCAA CACCATCAAG
GGCACGCGCG ACAACGGCAT CGAGATCCTG CGCACGGCGA TCGGCGACGA TGGCACGATG
GTGCTCGACA ACGTCATCGA GGACATCAAG GCCGGCCCCG GCGGCTCCGG CCAGTATGGC
AACGCCATCA ACGCCTTTCG CGCCGGCAAC GTGATCATCC GCGGCAATCG TATCAAGAAC
TGCGACTATT CGGCCGTACG CGGCAACTCG GCCTCGAACA TCCAGATCGT CGGCAACAGC
GTGACCGATA TGCGCGAGGT CGCGCTCTAT TCGGAGTTCG CGTTCGAGGG CGCGGTGATA
TCAGGCAACA CGGTGGATGG CGCCGCCTTC GGCGTCTCCG TCTGCAACTT CAACGAAGGC
GGCCGCATCG CCGTCGTCCA GGGCAACATC ATCCGCAATC TGATCCCGAA GCGCCCGATC
GGCACCGCGC CCGACGACGA CGCCGGCATC GGCATCTATG TCGAGGCGGA TTCCTCGGTA
ACCGGCAATG TCGTGGAAAA CGCGCCCTCC TACGGCATCG TCGCCGGCTG GGGCCGCTAT
CTCAGGGACG TCGTCATCTC CGGCAACGTG ATCCGCAACG CGCTGGCCGG CGTCGGCGTG
TCCGTCGTCC GCGGCGCCGG CACGGCTCTC ATCAGCAACA ACATGATCTC GGGCACGCCG
CGTGGCGCCG TGATCGGGCT GGATCACATC AAGCCGGTGA CCGCGGATCT GACGCAGGCC
GGCACGCAGC AATTCAGCCA GCTCGTGGTC ACCGCAAACG CGGTGCAACG CAGCTGA
 
Protein sequence
MDVNRRRILA GSAAGAAGAL ALPVDAAQAT PQISTLGRDA TQYGVKPNSP DEQTRALQRA 
IDEAARVQAP LALPPGTYRS SMLRLARGTQ LIGVRGATKL VFTGGGPSLL SGEGADGAGI
DGISLDGGSI ALPQRRGLLH LAAARDIRVI DCEIARSGGS GIWLEQVSGD VSGNLLTDIA
VTAIVSFDAL GLIVSRNTIK GTRDNGIEIL RTAIGDDGTM VLDNVIEDIK AGPGGSGQYG
NAINAFRAGN VIIRGNRIKN CDYSAVRGNS ASNIQIVGNS VTDMREVALY SEFAFEGAVI
SGNTVDGAAF GVSVCNFNEG GRIAVVQGNI IRNLIPKRPI GTAPDDDAGI GIYVEADSSV
TGNVVENAPS YGIVAGWGRY LRDVVISGNV IRNALAGVGV SVVRGAGTAL ISNNMISGTP
RGAVIGLDHI KPVTADLTQA GTQQFSQLVV TANAVQRS