Gene BBta_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3003 
Symbol 
ID5152799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3139063 
End bp3140025 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content66% 
IMG OID640557877 
Producthypothetical protein 
Protein accessionYP_001239031 
Protein GI148254446 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACC GCCGCAGCCT GCTGCTGGCC TCGCTCGCCG CCGGAGTGAC GATGACCACC 
ACAGCCCGCG CCAAGCCTTC GCAACCCGCG ACACCCGTCG ACTTCGACGT TCCGGCCGGC
GCCTGCGATT GTCACACCCA CATCCACGGC GATCCCGAAA AATTTCCGTT CGCCGCCACC
CGCGTCTACA CGCCGGAGCC GGCGTCGCCC GAGGAGATGG CCGCGTTGCA CAAGGCGCTG
CACATCCAGC GCGTCGTCAT CGTCACGCCG AGCGTCTACG GCACGGACAA TTCAGCGACA
TTGTTCGGCA TGAAGGCGCG CGGCAACGAC GCCCGCGGCG TCGCCGTGAT CGACGACAAG
ACGACCGAGG CACAACTCGA TACGATGAAC GCGGACGGCT TCCGCGGCAT CCGTCTCAAC
CTTGCGACCG GCGGCATCAA CGATCCCAAT GTCGGCCGCG CCCGCTTCCA GGCCGCGGTC
GAGCGCATCA AAGCGCGCGG CTGGCACGTC CAGCTCTACA CCAACACGCC AATGATCGCA
GCCATCAAGG ATCTCGTGAT GCAGTCGCCG GTCCCGGCGG TGTTCGATCA TTTTGGCGGT
GCGCAGGCCG AACTCGGCCT CGAGCAGACC GGCTTCGCCG ACCTCCTTGA TCTCGTCCGC
AGTGGCAAGG CCTATGTCAA GATTTCCGGC GCCTACCGCG CCTCGACCCG CGGCCCCGAC
TACGCCGACG TGATCCCGTT TGCGCAGGCG TTGATCGCAG CCAACCCCGA CCGCATCGTC
TGGGGCACCG ATTGGCCGCA TCCGGATTCC TCGCCGCATC CCGAATTGAA GGTGACGGAC
GTCCGGCCGT TCTACGCGAT CGACGACGGC CGCCTGATGA ACCAGCTGCC GGTGTGGGCC
CCGGACGCCA CGATCCGCAA GAAGATCCTG GTCGACAATC CGGCACGACT GTACGGGTTT
TGA
 
Protein sequence
MLNRRSLLLA SLAAGVTMTT TARAKPSQPA TPVDFDVPAG ACDCHTHIHG DPEKFPFAAT 
RVYTPEPASP EEMAALHKAL HIQRVVIVTP SVYGTDNSAT LFGMKARGND ARGVAVIDDK
TTEAQLDTMN ADGFRGIRLN LATGGINDPN VGRARFQAAV ERIKARGWHV QLYTNTPMIA
AIKDLVMQSP VPAVFDHFGG AQAELGLEQT GFADLLDLVR SGKAYVKISG AYRASTRGPD
YADVIPFAQA LIAANPDRIV WGTDWPHPDS SPHPELKVTD VRPFYAIDDG RLMNQLPVWA
PDATIRKKIL VDNPARLYGF