Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2988 |
Symbol | |
ID | 5154587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3119970 |
End bp | 3121220 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640557864 |
Product | hypothetical protein |
Protein accession | YP_001239018 |
Protein GI | 148254433 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTCGA ACATGAACCA GTCCCCGCAA TTGCTGAGTA CAAAACGGCT GATCATCGGT TTGGCGACGC TGGCCGTGGC CGGCGCGGGT GGCTATGTCT ACGCCCAATT CCGTTCGATG CCGTCCGCCA AGGACAATAT CGAGCTGTCC AGCCAGTCGC GCCGCAATAG CACCACTTTC ACGCCCTCGG CAGCGGAATG GGCGACGCTG ACCATCGAGC CGGTCTGTGA CAAGATCTTC CGCGCAGAGC ACATCACCGA GGGCAAGGTC GCCGTCGACG AGGACCGTTC GACACCGGTT TTCTCGCCCT ATGCCGGCCG CGTGACCAAG TTGCTGGCGC GCCCGGGCGA GACCGTCCGC CAGGGCCAGC CGCTGTTCGT CATCGAGGCC GCCGATACTG TCCAGGCGCA GAACGATTTC ATCACCGCGA TCACCTCGAT GAACAAGGCC AAGTCGGCGC TGGATCTCGC TGATATCCAG TACAAGCGCG CGAAGGATTT GTTCGAGGGG CGGGCGATCC CGCTGAAGGA CTTTCAGCAG GCGGAGGCAA CCTCCGTTCA GGCCCAGAAC GACATGCGTT CGTCACAAAC GGCGCTGGAG GCGGCCCGCA ACAAGCTGCG TATCCTCGGC TTCACCGATG CCGCGATCGC CGATTTCCAG AACAAGGGCA CCATCGATCG CGAGATCACG ATCTACGCGC CGATCGGCGG CACGGTCGTG CAGCGCAAGG TCGGGCCGGG CCAGTACGTC AATGCCGGCG CGAGCGATCC CGTGTTCGTG ATCGGAGATC TGTCGACCGT CTGGCTCACG GCCTTCGTTC GGGAGAGCGA CGCCGCGCTG GTCGATGTCG GCGAGGAAAT CCTCGTCAAC GTGCTGGCGC TGCCAGGCCG TCCTTTGAAG GCCAGCATCA ATTATGTCGC CACGTCGATC GACCCGGCGA CGCGCCGGCT GTTGGTGCGC GCGACCATCG ACAACAAGGA CGGTCTGCTC AAGCCGGAGA TGTTTGCCAA CGTCACGATC TATTCTCCGG GCGAAAAGCC CGCCGTGGCC GTGCCGCGGC AGGCGCTGAT CTATGAAGGC AACCAGGTTC GGGTCTGGGT CGCTCGTCCC GACAAATCGA TCGAGCTCCG CAAGATCAAG ACCGGCCTCG TCAACGGCGA CCAGGTGGCC GTGGAGGACA ATCTGAGCGC GGGCGAGCAG ATCGTCACCA AAGGCAGCCT GTTCATCGAT CGCGCTGCCT CCGGCAGCTG A
|
Protein sequence | MASNMNQSPQ LLSTKRLIIG LATLAVAGAG GYVYAQFRSM PSAKDNIELS SQSRRNSTTF TPSAAEWATL TIEPVCDKIF RAEHITEGKV AVDEDRSTPV FSPYAGRVTK LLARPGETVR QGQPLFVIEA ADTVQAQNDF ITAITSMNKA KSALDLADIQ YKRAKDLFEG RAIPLKDFQQ AEATSVQAQN DMRSSQTALE AARNKLRILG FTDAAIADFQ NKGTIDREIT IYAPIGGTVV QRKVGPGQYV NAGASDPVFV IGDLSTVWLT AFVRESDAAL VDVGEEILVN VLALPGRPLK ASINYVATSI DPATRRLLVR ATIDNKDGLL KPEMFANVTI YSPGEKPAVA VPRQALIYEG NQVRVWVARP DKSIELRKIK TGLVNGDQVA VEDNLSAGEQ IVTKGSLFID RAASGS
|
| |