| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2987 |
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| Symbol | dnaE2 |
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| ID | 5154586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3115991 |
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| End bp | 3119581 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557863 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_001239017 |
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| Protein GI | 148254432 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCGA TCCCCTATGC CGAGATCGGC GTCACCACCA ATTTCTCGTT CCTGCATGGC
GGCTCGCATC CGCAGGACTA TGTGCACCAG GCCGCCGAAT ATGGTCTCAC CGCCATCGGC
ATCGCCGATC ACAACACGCT GGCCGGCATC GTGCGCGCCT ATAGCGAGTT GAGTAACGAC
CGGCTGAGTT ACAAGCCGAA GCTGATCTAT GGCGCGCGGC TGGTGTTCAG CTGCGGCACC
CCGGATATCC TGGTCTATCC GCGCGACCGC GCGGCGTACG GCCGGCTGTG CCAATTGCTC
ACCCGCGGCA AGCGCGGCAG TGATCTCGAC AGGGTCGCCA AGGGCGATTG CCGCCTGAGC
TTCGCGGATC TGTTCGACTT CATCGCGGGC CAGCTCCTGG TGCTGATGCC GCCGCATCGC
TTTGACGAGG ACGCCCTCGG CAACATCCTG GCACGGCTGA AAGACAGCCG CGCCGACGGC
GTCTGGCTCG CGGCGAGCCT GCTGTATCGC GGGGATGACC GCCGCCGGCT GGCGCGGCTC
GCGCGTCTGG CGGCTTCAAG CAAGGTGCCG CTGATCGCGA CCAACGACGT GCTCTATCAC
CATCCCCAGC AGCGGATGCT GCAGGATGTG CTGACCTGCA TCCGCGAGAA GGCCACGATC
GAGAGCATCG GCCGCCGTCT CCAGGCCAAT GCCGAGCGCC ATCTCAAGCC GGGACACGAG
ATGGCGCGGC TGTTCCGCGA TTACCCCGAT GCCATCACTG AGACCATCCG CTTCACCGAC
CGCATCGTCT TTTCGCTTGA CCAGCTCAAA TACCAATATC CCGACGAGCC GGTGCCGCCC
GGCAAGACCG CGCAGGGGCA TCTGGAGGAC CTGACCTGGG CCGGCGCGAA AACCTATTTC
GGCGATGACC TCGACGACAG GCTGCGCGCG GTCCTCAACA AGGAGCTGGC GCTGATCGCC
GAGCTCAACT ACGCGCATTA TTTCCTCACC GTCCACGACA TTGTCCGCTA CGCGCGGAGC
CAAGGCATTC TGTGCCAGGG TCGTGGCTCG GCAGCGAATT CGGCGGTATG CTACGTGCTC
GGCATCACCT CGGTCGATCC GACCAAGATC GACCTCTTGT TCGAGCGCTT CATCTCCAAG
GAGCGGCTGG AGCCGCCGGA TATCGACGTC GATTTCGAGC ATTCGCGGCG CGAGGAGGTG
ATGCAATATG TCTACCGCCG CTATGGCCGC CACCGCGCCG CGATCATCGC CACCGTCATC
CATTATCGCC CGCGCAGCGC CATTCGCGAT GTCGGCAAGG CGCTGGGGCT GACCGAGGAC
GTCACCGCCG TGCTCGCCGA CACCGTGTGG GGCAGCTGGG GTGACGGGCT CTCCGACATA
CAGGTGCGTC AAGCCGGGCT CGATCCCGCC AATCCGATGA TCCGACGCGC GGTCGAACTC
GCGGCCGAGC TGATCAATTT TCCGCGCCAT CTCTCGCAGC ATGTCGGCGG CTATGTGCTG
ACCCAGGACC GGCTGGACAG TTACGTGCCG ATCGGCAATG CCGCGATGGA CGACCGCACC
TTCATCGAAT GGGACAAGGA CGACGTCGAC GCGCTCAGCA TGATGAAGGT CGACGTGCTG
GCGCTGGGCA TGCTGACCTG CATCCGCAAA TGCTTCGACC TGATCGCCGA TCACAAGGGC
AGGCGGTATG TGCTCGCGGA TATCAAATCG GAGGATGATA ACGAAGTCTA TCAGATGCTG
CAGCGAGGCG AGTCGCTCGG CGTGTTCCAG GTCGAGAGCC GGGCGCAGAT GAACATGCTG
CCGCGCCTCA AGCCGCGCAC CTTCTACGAT CTCGTCATCG AGGTCGCGAT CGTCAGGCCC
GGGCCGATCC AGGGCGACAT GGTGCATCCT TATCTGCGCC GCCGGAACAG GCTGGAAAAG
GTGACCTATC CGTCGCCGTC ACCGGATCAT GGTCCGGCGG ATGAACTCTA CAAAGTGCTG
CACAAGACGC TCGGCGTGCC GCTGTTCCAG GAGCAGGCGA TGCGGATCGC GATCGAGGCC
GCCAAGTTTT CACCCGAGGA GGCCAACGGC CTGCGCCGCG CGATGGCGAC GTTCCGCAAT
GTCGGCACCA TCGGTTCCTA TGAGGAGAAG ATGGTCTCGA GCATGATCGC GCGCGGCTAC
GATCCGGCCT TCGCCAAGAG CTGCTTCGAC CAGATCAAGG GCTTTGGCTC CTACGGCTTT
CCGGAAAGCC ATGCCGCGAG TTTCGCACAA TTGGTCTATG TCTCGTCCTG GCTGAAATGC
TTCCACCCGG ATGCCTTCTG CTGCGCGCTT CTGAACTCGC AGCCGATGGG GTTCTACGCG
CCGGCGCAGA TCGTCGGCGA CGCCCGCAAG AACGGCGTCG AGATCCGCAA CATCGACGTC
TCCCACAGCT TCGCCGACAA CACGCTGGAA GAGACCGACG GCAAATACTG CGCCGTCCGC
CTCGGCTTCC GCCAGATCGA CGGCTTCCGC TGGATCGACC GCGACGAGGA GCGGATCAGG
AAGCTGTCGG AGGTGGTGCG AAAAGCGCAG GCGGCGGCTG TCTCTCCACG TTCTTTGCCA
GCTATCTCCT CGGTGTCATT CCGGGGCACG CGTAGCGCGA GCCCGGAATC CATAACCACG
ATCGGGAGTA CGGATTCCGG GCTCGCCCTC CGGGCGCCCC GGAATGACAG CGTGGAGGCA
GTCGTTTCTG ACTCACAAGC CCTTGATGAA GGTCGAGGGG GCGATGCTGT CGCTTCACTC
CAGAACGATG ACCGCGACGA TGACTGGGCC GACCGCATCG TCAAGGCGCG CGCCCGCGGC
CCCTTCACCT CGCTAGAGGA CTTCGCCCGC GACACCGCGC TGCCCAAGCG CGCGCTCTTG
CTGCTGGCCG ATGCCGATGC GTTCCGCTCG CTCGGGCTCG ATCGCCGCGC CGCGCTCTGG
GCCGTGCGCC GGCTACCCGA CGACGTGCCG CTGCCCTTGT TCGAGGCCGC GATCGCCCGC
GAACAGCCGG ACGAGGGCGC CAAGCCGCTG CCGGAAATGC CGCTGCCGGA GCAGGTGGTC
GCGGACTATC AGACCATCCG CCTGTCCTTG AAGGGCCATC CGATGGAGTT CCTGCGCCGG
CGCTTCACGG CTGAGGGCGT GCTGGCCTGC CGCGATGTCA ACGACGCCAA TGATCGCCGC
CATATCCGCT GCGCCGGCGT GGTGCTGGTG CGGCAGCGGC CGGGCAGCGC CAAGGGCGTC
GTGTTCATGA CCCTGGAGGA CGAGACCGGG ATCGCCAACA TCGTGGTGTG GCCGAAGGTG
ATGGAGACCT TCCGCAAGGA GGTGATGGGC GCGCGCCTGG TGCTGGTCGA GGGCCGCATC
CAGAGCAGTC CGGAGAAGGT CGTGCATCTC GTCGCCGAGC GTCTCGTCGA CCGCAGCGCC
GATCTCGCAT TGCTGGCGGA TGATCGCCTC GGCAGCAGCG CCATCCCGCA AGGCCCGATG
CCGGCAGAGC CGCTCAACGA CGACCGCCGC GATCATCCCG ACAATCCCTC GCAGCGCGTC
AGCCATCCCC GCAACGTCCG GATTTTGCCA CGCTCGCGCG ATTTTCATTG A
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| Protein sequence | MTPIPYAEIG VTTNFSFLHG GSHPQDYVHQ AAEYGLTAIG IADHNTLAGI VRAYSELSND
RLSYKPKLIY GARLVFSCGT PDILVYPRDR AAYGRLCQLL TRGKRGSDLD RVAKGDCRLS
FADLFDFIAG QLLVLMPPHR FDEDALGNIL ARLKDSRADG VWLAASLLYR GDDRRRLARL
ARLAASSKVP LIATNDVLYH HPQQRMLQDV LTCIREKATI ESIGRRLQAN AERHLKPGHE
MARLFRDYPD AITETIRFTD RIVFSLDQLK YQYPDEPVPP GKTAQGHLED LTWAGAKTYF
GDDLDDRLRA VLNKELALIA ELNYAHYFLT VHDIVRYARS QGILCQGRGS AANSAVCYVL
GITSVDPTKI DLLFERFISK ERLEPPDIDV DFEHSRREEV MQYVYRRYGR HRAAIIATVI
HYRPRSAIRD VGKALGLTED VTAVLADTVW GSWGDGLSDI QVRQAGLDPA NPMIRRAVEL
AAELINFPRH LSQHVGGYVL TQDRLDSYVP IGNAAMDDRT FIEWDKDDVD ALSMMKVDVL
ALGMLTCIRK CFDLIADHKG RRYVLADIKS EDDNEVYQML QRGESLGVFQ VESRAQMNML
PRLKPRTFYD LVIEVAIVRP GPIQGDMVHP YLRRRNRLEK VTYPSPSPDH GPADELYKVL
HKTLGVPLFQ EQAMRIAIEA AKFSPEEANG LRRAMATFRN VGTIGSYEEK MVSSMIARGY
DPAFAKSCFD QIKGFGSYGF PESHAASFAQ LVYVSSWLKC FHPDAFCCAL LNSQPMGFYA
PAQIVGDARK NGVEIRNIDV SHSFADNTLE ETDGKYCAVR LGFRQIDGFR WIDRDEERIR
KLSEVVRKAQ AAAVSPRSLP AISSVSFRGT RSASPESITT IGSTDSGLAL RAPRNDSVEA
VVSDSQALDE GRGGDAVASL QNDDRDDDWA DRIVKARARG PFTSLEDFAR DTALPKRALL
LLADADAFRS LGLDRRAALW AVRRLPDDVP LPLFEAAIAR EQPDEGAKPL PEMPLPEQVV
ADYQTIRLSL KGHPMEFLRR RFTAEGVLAC RDVNDANDRR HIRCAGVVLV RQRPGSAKGV
VFMTLEDETG IANIVVWPKV METFRKEVMG ARLVLVEGRI QSSPEKVVHL VAERLVDRSA
DLALLADDRL GSSAIPQGPM PAEPLNDDRR DHPDNPSQRV SHPRNVRILP RSRDFH
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