Gene BBta_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2978 
Symbol 
ID5154661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3104342 
End bp3104674 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content61% 
IMG OID640557854 
Productputative copper binding protein 
Protein accessionYP_001239008 
Protein GI148254423 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.359008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAT TCGTGTCGTT CGACCGCAGC ATCGGCTGGG CGCTCGCTGC TGCCCTGCTC 
GGCTTCGCGG CAACCCCGCT GCGCGCCGAG ACCATCAAGG TCACGATCGA CAATTTCACC
TTCACCCCGG CCGAGGTGAC GGTGAAGGCC GGCGATACCG TGACCTGGAC CAACCACGAC
GACATTCCGC ATACGGTGGT GTCGGCCGGC AAATACCGAT CGAAGACGCT CGACACCGAT
GACAGCTTTT CGTTCACCTT CGCGGCGAGC GGCGACTACA AATATTTCTG CTCGCTGCAT
CCGCACATGA CGGGACTGGT GAAGGTTGAG TAG
 
Protein sequence
MTGFVSFDRS IGWALAAALL GFAATPLRAE TIKVTIDNFT FTPAEVTVKA GDTVTWTNHD 
DIPHTVVSAG KYRSKTLDTD DSFSFTFAAS GDYKYFCSLH PHMTGLVKVE