| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2973 |
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| Symbol | |
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| ID | 5152997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3097867 |
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| End bp | 3100455 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557849 |
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| Product | putative protein export membrane protein |
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| Protein accession | YP_001239003 |
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| Protein GI | 148254418 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.228418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACAA CGATTGTCGT CTCCATCGTC AAGGCCTGCA CGCGGTTTGC GTGGCCGACA
TTGATTGCGG GCCTGCTTTT GTCGGTGGCG GCGGGCGTCT ACACCGCCGG TCATTTCGCC
ATCAACACTG ACATCAACAA GCTGATTTCC CCGGAGCTCG ATTGGCGCAA GCGCGATCAG
CAATATGAGC AGGCGTTCGA TCGCGACCGG ATGATCCTCG GCGTGGTCGA GGCGGCGACG
CCGGAACTGA CCGGCGTGGC GGCGGATGCG CTCGCCAAGA AGCTCAAGGG CGACACCAAG
AACTTCTCCT CCGTGGATCT GCTCGGCGGC GGCGAGTTCT TCGCCCGTAA CGGGTTGCTG
TTCCTGCCGA CGGACGAGGT GAAGCAGTTG ACCGGGCAGT TCGCTGCCGC GGCGCCGCTG
ATCGAGATCA TGGCCGGTGA CCCGTCGATC CGCGGTCTGA CCGGTGCGCT GGAGACGGGT
CTTGCCGGCG TCACGCGTGG CCAGGTCAAG CTCGACAGCA CCGCGCGTCC GTTCGACTAC
ATCTCGCAAA CGGTGGAGAC CCTGCTCGAC AAGGGCGATG CCACCTTCTC CTGGCGCCAG
CTGATCTCGG ACAAGCCGCT CACCGAGGGC GACAAGCGGG CCTTCATCCA GTTCAAGCCG
ATCCTCGACT ATCAGGCGCT CGAGCCCGGC AAGGCGGCGA CCGATGCCAT CCGCCAGGCG
GCGGCCGAGC TCGATTTCCC CAACCGGTTC CACGCCCGTG TCAGGCTGAC CGGGCCGGTC
CCGATCGCCA ACGAGGAATA CGCCACGGTG CAGGAGGGCG CCGTCGTCAA CGGCATCGGC
ACCGTCGTGG TGGTGCTGGT CATCCTGTGG CTGGCGCTGC ATTCGGCCAA GATCATCTCG
GCCGTGTTCA TCAATCTGTT CATGGGCCTT GCCATCACCA CGGCGGTGGG CCTGATGATG
GTCGGCTCGC TGAACCTGCT GTCGGTCGCC TTTGCCGTGC TGTTCATCGG CCTCGGCGTC
GATTTCGGCA TCCAGTTCAG CGTCCGCTAC CGCTCCGAGC GCTTCAAGAA CGACGATCTG
CCGGAGGCGC TGGCCGAGGC GGCGCGGCGC TCCGCGGTGC CGCTGTCGCT CGCGGCGATG
GCGACCGCTG CCGGATTTCT CTGCTTCCTG CCGACCGACT ACAAGGGCAT TTCCGAGCTC
GGCGCCATCG CCGGGGCCGG CATGATGATC GCCTTCCTGT CGTCGATCAC GGTTCTGCCG
GCGCTGCTGA AGATCCTCAA TCCGCCCGGT GAGAAGGAGC CGGTCGGCTA TGCCTTCCTG
GCCCCGGTCG ATCACTTCCT CGAAACGCAC CGGGTGCCGA TCATCGTCGG CACGCTTGGC
CTCGTCATCG CTGGCCTGCC GCTGCTTTAT TACATGAAGT TCGACTTCAA CCCGATGAAC
CTGCGCAATC CGCACGCTGA ATCGATTGCG ACCTATCTGG ACCTCCGCAA GGACCCGAAC
ACCGGCGCCA ATGCCATCGA CGTGCTGACG CGCTCGGAAG CCGAGGCCAA GGCGATCGAG
GCCAAGCTCG CGAAGCTGCC TGAAGTGGCG CGCGTGATGT CGCTCGACAG CTTCGTGCCG
GAGGATCAGC CGGCCAAGCT GGCGATGATC GCGCAGGGCG CGAAGGTGCT CGGGCCTGCA
CTCAATCCGG ATCAGGTCGA TGCAGCGCCG ACCGACAAAG AGAATATCGA TGCGCTGAAT
TCGACCGTCA ACAATCTGCG CCGCACGGCC GGTGACGGGC AGGGGCCCGG CGCGGTGGCA
TCTCGGCGGT TGGCCGACGC GCTCGCCAAG CTCGCCGGCG CCAGCGAGAG CCTTCGCAAC
AAGGCGCAGG CCGTGTTCGT TGAGCCGCTG CGGATCACGC TGGAGCAACT CAACGCGACC
TTGCAGGCGC AGCCGGTGAC GCTTGCGAAC CTGCCGCCGG AGCTCGTATC GCAGTGGAAG
AGCAAGGACG GCCTGATTCG CGTCGAGGCC CAGCCCAAGG GTGACCCGAA CGACAACGAT
AATCTCCGGC GGTTCGCCAA TGCGGTGCTG GCCGCGGAGC CGAATGCGAT CGGAGGACCG
GTCTCGATCC TGAAGTCCGG TGACACGATC GTGAAGGCGT TCATTCACGC CGGCATCTAC
TCGCTGGTCG TGATCAGCCT GTTGTTGTGG GTGACGCTGC GCCGCTTCTC GGACGTGCTC
ATGACGTTGG TGCCGTTGCT GGTGGCCGGT GCGGTGACGC TCGAAATCTG CGTTCTGATC
AAGCTGCCGC TGAACTTCGC CAACATCGTC GCACTGCCGC TGCTGCTCGG CATCGGCGTG
GCCTTCAAGA TCTATTATGT CGTGGCCTGG CGTTCCGGCA GAACGAACCT GCTGCAGACC
AGCCTGACAC GCGCGATCTT CTTCAGCGCG CTGACGACAG CGACCGCCTT CGGCAGCCTG
TGGCTGTCGA GCCACCCCGG GACATCCAGC ATGGGCAAGT TGCTGGCGCT GTCGCTGGTC
ACCACGCTGG CCGCGGTGTT GCTGTTCCAG CCGGCCCTGA TGGGCAAGCC GCGCGAGGTC
AAGGAATAG
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| Protein sequence | MLTTIVVSIV KACTRFAWPT LIAGLLLSVA AGVYTAGHFA INTDINKLIS PELDWRKRDQ
QYEQAFDRDR MILGVVEAAT PELTGVAADA LAKKLKGDTK NFSSVDLLGG GEFFARNGLL
FLPTDEVKQL TGQFAAAAPL IEIMAGDPSI RGLTGALETG LAGVTRGQVK LDSTARPFDY
ISQTVETLLD KGDATFSWRQ LISDKPLTEG DKRAFIQFKP ILDYQALEPG KAATDAIRQA
AAELDFPNRF HARVRLTGPV PIANEEYATV QEGAVVNGIG TVVVVLVILW LALHSAKIIS
AVFINLFMGL AITTAVGLMM VGSLNLLSVA FAVLFIGLGV DFGIQFSVRY RSERFKNDDL
PEALAEAARR SAVPLSLAAM ATAAGFLCFL PTDYKGISEL GAIAGAGMMI AFLSSITVLP
ALLKILNPPG EKEPVGYAFL APVDHFLETH RVPIIVGTLG LVIAGLPLLY YMKFDFNPMN
LRNPHAESIA TYLDLRKDPN TGANAIDVLT RSEAEAKAIE AKLAKLPEVA RVMSLDSFVP
EDQPAKLAMI AQGAKVLGPA LNPDQVDAAP TDKENIDALN STVNNLRRTA GDGQGPGAVA
SRRLADALAK LAGASESLRN KAQAVFVEPL RITLEQLNAT LQAQPVTLAN LPPELVSQWK
SKDGLIRVEA QPKGDPNDND NLRRFANAVL AAEPNAIGGP VSILKSGDTI VKAFIHAGIY
SLVVISLLLW VTLRRFSDVL MTLVPLLVAG AVTLEICVLI KLPLNFANIV ALPLLLGIGV
AFKIYYVVAW RSGRTNLLQT SLTRAIFFSA LTTATAFGSL WLSSHPGTSS MGKLLALSLV
TTLAAVLLFQ PALMGKPREV KE
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