| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2972 |
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| Symbol | ispH |
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| ID | 5152996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3096452 |
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| End bp | 3097396 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640557848 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001239002 |
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| Protein GI | 148254417 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0711104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTGACC GACGTCCACT GCAGATCTAT CTCGCGCAGC CGCGCGGTTT TTGTGCGGGA
GTCGTGCGCG CCATCGAGAT CGTCGAGCGC GCGCTGGAGA AGTACGGCCG GCCCGTTTAT
GTGCGTCACG AGATCGTGCA CAACAAATAT GTCGTCGAGA GCCTCAAGGC CAAGGGCGCG
ATCTTCGTCG AGGACCTCTC GGAAGTCCCG CCGCGCGCGG TGACCGTGTT CAGCGCGCAT
GGCGTGGCAC GCAGCGTCGA GGAGGAGGCG GCCGCCCGGG GCCTGCCGGT CCTCAATGCC
ACCTGCCCCC TCGTGACCAA GGTGCATAAC CAGGGCAAAC GCTATATGTC CAAGGGCCGT
ACCCTGGTAC TCATCGGCCA CGCCGGACAT CCCGAGGTCG AGGGCACCAT GGGCCAGGTT
CCCGGCCCCG TTCATCTGGT CCAAAACGTC GCCGATGTGG CCGCTTTGCC CCTGCCCAGC
GACACGCCCG TGGCCTATAT CACCCAGACC ACCCTGAGCG TAGACGACAC CAAGGACATC
ATTTCGGCCC TTCAAGCCCG CTTTACAGAC CTTCAAGGTC CCGATATCCG GGATATCTGC
TATGCGACAC AGAACCGCCA ATCTGCGGTA TGGGACTTAA GCAAGCTGGT GGACGTTATC
CTGGTGGTGG GCGCCGCCAA TAGCTCCAAC TCGAACAGAT TGCGCGAAAT CGGCACCGAG
GCCGGGGTCG CAAGCTATCT GGTCGCGGAT GGCAGCGAGC TCAATCCGGA GTGGCTGAAG
GGCGCCCGGG CCGTCGGCAT CACCGCTGGC GCCTCGGCTC CCGAAGTGCT CGTCGACGAC
GTCATCGAAG CCTTGCGGCG CATCGGACCG GTTGAGGTCG CGGTGGTCCC GGGGCGGGAA
GAAAACATCG AATTTCGCCT GCCGGCCGAA TTGGTCGCGG GCTGA
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| Protein sequence | MTDRRPLQIY LAQPRGFCAG VVRAIEIVER ALEKYGRPVY VRHEIVHNKY VVESLKAKGA
IFVEDLSEVP PRAVTVFSAH GVARSVEEEA AARGLPVLNA TCPLVTKVHN QGKRYMSKGR
TLVLIGHAGH PEVEGTMGQV PGPVHLVQNV ADVAALPLPS DTPVAYITQT TLSVDDTKDI
ISALQARFTD LQGPDIRDIC YATQNRQSAV WDLSKLVDVI LVVGAANSSN SNRLREIGTE
AGVASYLVAD GSELNPEWLK GARAVGITAG ASAPEVLVDD VIEALRRIGP VEVAVVPGRE
ENIEFRLPAE LVAG
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