| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2968 |
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| Symbol | |
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| ID | 5155118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3092619 |
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| End bp | 3093869 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640557845 |
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| Product | putative phytoene dehydrogenase |
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| Protein accession | YP_001238999 |
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| Protein GI | 148254414 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.211765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA TCGCTCACAT TATCGGCGCC GGAATCTCCG GCCTCTCCGC CGGCGTGCGG
CTCGCCAATG CCGGCTACAC CGTCCATGTC CACGAGGCGA CCCAGCAGCT CGGCGGCCGG
TGCCGCTCTT ATTACGATGC CGCCACCGAT CTCGTGATCG ATAATGGTAA TCATCTGCTG
CTCTCGGCCA ACCACCACGT GCTGGCCTAT GCCCGGGTGA TCGGCTCGGA GGCAGGGCTG
GTCGGGCCGA AGGAGGCGCA ATTCGCCTTC GTCGATATCC GGACCGGCCA GCGCTGGCTG
CTCGATCTCG GCAGCGGCCG GCTGCCGCTC TGGGTGTTCG ACGAAAGCCG CCGCGTCCCC
GATACCACGC TCGGGGACTA TCTGGCGCTG TCGCCGCTGA TCTGGGCCGG CACCGCCAAG
ACCATCGGCG ATACGATACC CTGCAAGGGC ACGTTGTATG ACCGGCTGGT GCAGCCGCTG
CTGCTGGCGG CCTTGAACTG CGATCCGCCC GAGGGCTCGG CTGGCCTGGC CGGGGCGATC
GTGCGCGAGA CGTTGCTGGC CGGCGGCCAG GCCTGCCGTC CGCTGATCGC GCGCGACGGT
CTCTCCGGCG TGCTGATCGA CCCCGCCGTC AAATTCCTGG AAGGCAAGGG CGGCAGCGTC
CGGATCGGGC GGGAGCTGCG CAGCCTCGAT CAGGCCGCTG GCCGCGTCAC CGGGTTGCGC
TTCGGCGGTG ACGAGACCGT CGCGCTCGGG CCGGATGACG TTGTCGTGCT GGCGGTGCCG
CCGCGGCCCG CGATGGCGCT GCTGCCGGGC CTGACGGGCC CGACGAAGTT TCGTGCCATC
GTCAATGCCC ATTTCCGCAT CACCCCGCCG AAGGGCGCGC CGGCGCTGCT CGGCGTGGTC
GGCGGACTGG TCGAATGGCT GTTTGCCTTT CCGGAGCGGC TGTCGGTCAC GATCAGCAAT
GGCGACAGGC TGGTCGACAT GCCGCGCGAG CAGCTCGCCG CTGCGATCTG GGCCGACGTC
TGCAAGGCCG CTGGCATCTC CGCCGAGCTG CCGCCCTGGC AGATCGTTCG CGAGCGCCGC
GCGACCTTCG AAGCCACGCC GGAACAGAAC GCGCTGCGGC CGGGCGTCAA AACCAGTTTT
GCCAACCTCG CTCTGGCCGG GGACTGGACC GATACCGGCC TGCCGGCGAC GATCGAGGGA
TCGGTGCGGT CCGGCGATCG CGCTGCGGAT CTGTTGCTCG GCAAAGCCTG A
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| Protein sequence | MNKIAHIIGA GISGLSAGVR LANAGYTVHV HEATQQLGGR CRSYYDAATD LVIDNGNHLL
LSANHHVLAY ARVIGSEAGL VGPKEAQFAF VDIRTGQRWL LDLGSGRLPL WVFDESRRVP
DTTLGDYLAL SPLIWAGTAK TIGDTIPCKG TLYDRLVQPL LLAALNCDPP EGSAGLAGAI
VRETLLAGGQ ACRPLIARDG LSGVLIDPAV KFLEGKGGSV RIGRELRSLD QAAGRVTGLR
FGGDETVALG PDDVVVLAVP PRPAMALLPG LTGPTKFRAI VNAHFRITPP KGAPALLGVV
GGLVEWLFAF PERLSVTISN GDRLVDMPRE QLAAAIWADV CKAAGISAEL PPWQIVRERR
ATFEATPEQN ALRPGVKTSF ANLALAGDWT DTGLPATIEG SVRSGDRAAD LLLGKA
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