Gene BBta_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2949 
Symbol 
ID5155524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3071594 
End bp3072472 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID640557828 
Productputative transaminase-like enzyme 
Protein accessionYP_001238982 
Protein GI148254397 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.172083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTACG ACATCCGGCA TGTCACCACC TATGAATATG AGAGCAACGT CAGCTTTGCG 
CGCTGCTCGC TGCGGCTGGA GCCGCTCAGT GGCGGCGGCC AGGAGCTGAT CTCCCACAGC
GTCGACATCC GGCCGCGGCC CTCGGAGCGG ACGGCACGGC GCGACTTCTT CGGCACCTTG
ACCGAGAGCA TCGTCATCGA CACCCAGCAC CGCCATCTGC TCATCGATGC GCGCTCGCGG
GTCAAGCTGT CGCGCACACC GCCGGAGCGC GATGCGCCGA GCTCGGCCTG GGAGCGCGTG
CGCGATGCCG CCTTCGAGGC CACCAGCCTC GGGCCGTCGT CGCCGATCGG CTATGTCTTC
GCCAGCGCGC TGGTGCCGGT GCTCGCTCCG GTGGCCGACT ATGCCGCCGG CAGCTTTCCA
GCGGGGACCG GCATCGTCGC CGGAGCCGCG GACCTCATGC GGCGCATCCA CCAGGAGTTC
CGCTACGATC CCAAGGCCAC CGTGATTTCG ACCCCGTTGC GCGAGGTATT CGACAAGCGC
CACGGCGTCT GTCAGGACTT CGCCCATGTC ATGATCGCGG GCCTGCGGGG TCTCGGATTG
CCGGCGGCCT ATGTCAGCGG CTATCTGCGC ACCATCCCGC CGGAAGGCGA GCCGCGGCTG
CAGGGCGCCG ACGCGACGCA TGCCTGGGTG TCCGTGTGGT GCGGCGAAGC GCTCGGCTGG
GTGGGATTCG ATCCGACCAA TGATCTCCTG GTCGGCAATG ATCACATCAT GCTCGGCATG
GGCCGCGACT TCTCCGATGT CTCGCCGGTC GACGGCATCA TCGTCGGGTC GCCCAAGCAG
AAGCTCGGCG TTGCCGTCGA CGTTGTGCTG GTCGAGTAG
 
Protein sequence
MIYDIRHVTT YEYESNVSFA RCSLRLEPLS GGGQELISHS VDIRPRPSER TARRDFFGTL 
TESIVIDTQH RHLLIDARSR VKLSRTPPER DAPSSAWERV RDAAFEATSL GPSSPIGYVF
ASALVPVLAP VADYAAGSFP AGTGIVAGAA DLMRRIHQEF RYDPKATVIS TPLREVFDKR
HGVCQDFAHV MIAGLRGLGL PAAYVSGYLR TIPPEGEPRL QGADATHAWV SVWCGEALGW
VGFDPTNDLL VGNDHIMLGM GRDFSDVSPV DGIIVGSPKQ KLGVAVDVVL VE