Gene BBta_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2944 
Symbol 
ID5155610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3062576 
End bp3063355 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID640557823 
Productputative aldolase 
Protein accessionYP_001238977 
Protein GI148254392 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0711573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.972329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAATA ACAAGGTCAA GCAGCTCTGG GCCGAAGGCA AGGCGGTGGT GAATGCCTGG 
CTCGCGATCC CCTCGGGATT CTCCGCGGAG GTCGTGGCGC AGTGCGGCTT CGACAGCGTC
ACCGTGGATA TGCAGCACGG CGTGCAGGAT TATCTGTCGA TGGTGCAATG CTTCCAGGCG
ATGCATGGTC ACCCGGTGAC GCCGATGGTT CGGGTGCCCT GGAACGAGCC CGGGATCATC
GGCAAGGTGC TCGACGGCGG TGCCTATGGC GTGATCTGCC CGATGGTCAA TACGCCGCAG
GAGGCGCGCA ATCTCGTCTC CTACTCGAAA TATCCGCCGA AGGGCGTGCG TTCGAACGGC
CCGATCCGCT CGGGCATGTA TGGCGGCGCC GGCGAGTATC AGAAGACGGC CAATGACGAG
ATCGTGCTGT TGCCGATGAT GGAGACCAAG ACGGCGGTCG AGAACATGGA AGCCATTCTC
GATGTCGAAG GCATCGACGG TGTCTATATC GGGCCGTCCG ATCTCGGCTT TTCCTATGGG
CTTGTGCCGA AGCTCGACCG TGACGAGCCG GAGATCCTGA AGATCTATGA GAAGATCGTG
AAGGAATGCG GCAAGCGCGG CCTCAACCCC GGCATCCATT GCAGCGGCGC CGAAGGCGCT
GTCCGCGCCA TCAACATGGG CTTCAAGCTC GTGACCTTGT CGAATGAGGT CGGGCTGATG
CAGGTCTATG CTCGCCAGCA GGTCGCCCAG ACCCGGAAAG AGTCGGGCGG CAAAGCCTGA
 
Protein sequence
MANNKVKQLW AEGKAVVNAW LAIPSGFSAE VVAQCGFDSV TVDMQHGVQD YLSMVQCFQA 
MHGHPVTPMV RVPWNEPGII GKVLDGGAYG VICPMVNTPQ EARNLVSYSK YPPKGVRSNG
PIRSGMYGGA GEYQKTANDE IVLLPMMETK TAVENMEAIL DVEGIDGVYI GPSDLGFSYG
LVPKLDRDEP EILKIYEKIV KECGKRGLNP GIHCSGAEGA VRAINMGFKL VTLSNEVGLM
QVYARQQVAQ TRKESGGKA