| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2939 |
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| Symbol | |
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| ID | 5154959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3057769 |
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| End bp | 3059307 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640557818 |
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| Product | putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, HpcC-like protein |
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| Protein accession | YP_001238972 |
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| Protein GI | 148254387 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.291838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGG CCACACCCAA AGCCGACATC TACAAGGCCA ATCTCGACCG CGCCGCCCCC
CTGCTCGCCA AGCTCAAGGA CGAGGGCATC GGCCACTTCA TCGATGGCAA GGTGGTACCG
GCGATTTCGG GCGCGACGTT CGAGACGAAG TCGCCAATCG ACAACACCGT GCTGGCCAAA
GTAGCGCGCG GCAATGCCGA GGACATCGAC CGCGCGGCGA CCTCTGCTGC GCTCGCTTTC
AAATCCTGGC GCGAGATGGC GCCGGCGATG CGGCGCAAGC TCCTGCACCG CGTGGCCGAT
GCGATCGAGG ATCATGCCGA CGACATCGCC GTGCTCGAAT GCATCGACAC CGGTCAGGCC
TATCGCTTCA TGGCCAAGGC GGCGATCCGC GCCGCCGAGA ATTTCCGGTT TTTCGCCGAC
AAATGCACCG AGGCGCGCGA CGGGCTGAAT ACGCCGAGCG AAGAGCACTG GAACATCTCC
ACGCGGGTAC CGATCGGCCC GGTCGGCGTG ATCACCCCGT GGAACACGCC GTTCATGCTG
TCGACCTGGA AGATCGCCCC GGCGCTCGCG GCAGGCTGCA CGGTCGTGCA CAAGCCGGCC
GAATGGTCGC CGATCACGGC GCACTGGCTG GCAAAACTCG CCAAGGACGC CGGTATCCCC
GATGGCGTGC TCAACACTGT CCATGGCTTC GGCGAGGAGG CCGGCAGGGC GCTGACCGAA
CATCCTGCCA TCAAGGCGAT CGGCTTCGTC GGCGAGAGCA CGACCGGGTC GGCGATCATG
GCGCAGGGCG CGCCGACTCT GAAACGCGTG CATTTCGAGC TTGGCGGCAA GAACCCGGTG
ATCGTGTTCG ACGATGCCGA CCTCGATCGC GCGCTCGACG CCGTCGTGTT CATGATCTAT
TCGCTCAACG GCGAGCGCTG CACCTCCTCG AGCCGCCTGC TGGTGCAGCA GAACATTGCC
GAGACATTCA CGGCCAAGCT CGCGGCGCGC GTGCGTGCGC TGAAGGTCGG TCATCCGCTC
GATCCCGCGA CCGAGGTCGG GCCGCTGATT CATGAGCGGC ACCTCGCCAA GGTCTGCTCT
TATGTCGACA TCGCGCGCCA GGACGGGGCG ATCATTGCCG TCGGCGGCAA GCCGGTCGCT
GGTCCGGGCG GCGGCCACTA CGTCGAGCCC ACGCTCGTCA CGGGCGCGAG CCAGATCATG
CGCGTGGCGC AGGAAGAGGT GTTCGGGCCA TTCCTGACCG TGATCCCGTT CGGCGACGAG
GCGGACGCGA TCGCGATCGC CAATGACGTG CAGTATGGCC TCACCGGCTA TGTCTGGACC
GGCGACATGG GCCGCGCGCT GCGCGTCGCC GACGCGCTGG AGGCCGGCAT GATCTGGCTG
AACTCGGAGA ACGTCCGCCA TCTGCCGACG CCGTTCGGCG GCATGAAGGC GTCCGGCATC
GGCCGCGACG GCGGCGACTA TTCATTCGAC TTCTACATGG AGACCAAGCA CGTCTCGCTC
GCGCGCGGCA CCCACAAGAT CCAGCGGCTC GGCGTGTAA
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| Protein sequence | MDKATPKADI YKANLDRAAP LLAKLKDEGI GHFIDGKVVP AISGATFETK SPIDNTVLAK
VARGNAEDID RAATSAALAF KSWREMAPAM RRKLLHRVAD AIEDHADDIA VLECIDTGQA
YRFMAKAAIR AAENFRFFAD KCTEARDGLN TPSEEHWNIS TRVPIGPVGV ITPWNTPFML
STWKIAPALA AGCTVVHKPA EWSPITAHWL AKLAKDAGIP DGVLNTVHGF GEEAGRALTE
HPAIKAIGFV GESTTGSAIM AQGAPTLKRV HFELGGKNPV IVFDDADLDR ALDAVVFMIY
SLNGERCTSS SRLLVQQNIA ETFTAKLAAR VRALKVGHPL DPATEVGPLI HERHLAKVCS
YVDIARQDGA IIAVGGKPVA GPGGGHYVEP TLVTGASQIM RVAQEEVFGP FLTVIPFGDE
ADAIAIANDV QYGLTGYVWT GDMGRALRVA DALEAGMIWL NSENVRHLPT PFGGMKASGI
GRDGGDYSFD FYMETKHVSL ARGTHKIQRL GV
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