Gene BBta_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2897 
Symbol 
ID5151724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3003591 
End bp3004505 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID640557776 
Productdehydrogenase NAD(P)-binding domain-containing protein 
Protein accessionYP_001238930 
Protein GI148254345 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0872025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGC CATCGCAATT GAACGTCGCC GTGATCGGGC TCGGCTCCAT GGGATATGGC 
ATGGCGACCT CGCTCAAGCG TGCCGGCTTC GCGGTGACCG GATGCGACGT TTCGGCCGAT
GCCGTGGCGC GGTTCGTCGC CGATGGCGGC AAGGGCGCGA ACAGCCCGGC TGAGGCCGCA
GCAGGCGCGG ACATCGTCGT CAGCGTCGTC GTCAATGCGG CGCAGACCGA GGCCATTCTG
TTCGGCCCCG GCGGCGCGGC CGAGACCATG CCGAAGGACG CCGTGTTCGT CTCCTCCGCG
ACCATGGACC CGGATGTCGC GCGTCGCCTC GCCAAACAGC TCGAAGCCAC CGGCCGGCAC
TATCTCGATG CGCCGATCTC CGGCGGCGCG CAGCGTGCCG CGCAAGGCGA ATTGACCATC
CTGGCCTCGG GTAGCCCGGC GGCCTTCGCC AGGGCGCGGC CGGCGCTCGA CGCGATGGCC
GCCAAGCTCT ATGAGCTCGG CGATGCCGCG GGCCAGGGCG CCGCGTTCAA GATGATCAAC
CAGTTGCTCG CCGGCGTGCA CATCGCAGCC GCCAGCGAGG CGATTGCCTT CGCCGCCAAG
CAGGGCCTCG ACATCCGCAA GGTCTACGAG GTCATCACCG CCTCGGCCGG CAATTCCTGG
ATGTTCGAGA ACCGCATGCC GCACGTGCTC GATGGCGACT ACACGCCGCG CAGCGCGGTC
GAGATCTTCG TCAAGGACCT CGGCATCATC CAGGACATGG CACGCAACCA CCGCTTCCCG
GTGCCGGTCT CGGCCGCGGC GCTGCAGATG TTCCTGATGA CATCGGCCGC CGGCATGGGC
CGCGACGATG ATGCCTCGGT GGCGCGGATG TATGCGCAGG TCACCGGCAC CAAGCTGCCT
GGCCAATCCA ACTAA
 
Protein sequence
MPQPSQLNVA VIGLGSMGYG MATSLKRAGF AVTGCDVSAD AVARFVADGG KGANSPAEAA 
AGADIVVSVV VNAAQTEAIL FGPGGAAETM PKDAVFVSSA TMDPDVARRL AKQLEATGRH
YLDAPISGGA QRAAQGELTI LASGSPAAFA RARPALDAMA AKLYELGDAA GQGAAFKMIN
QLLAGVHIAA ASEAIAFAAK QGLDIRKVYE VITASAGNSW MFENRMPHVL DGDYTPRSAV
EIFVKDLGII QDMARNHRFP VPVSAAALQM FLMTSAAGMG RDDDASVARM YAQVTGTKLP
GQSN