| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2888 |
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| Symbol | |
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| ID | 5152975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2995073 |
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| End bp | 2995777 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640557767 |
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| Product | high-affinity branched-chain amino acid transport protein (ABC transporter ATP-binding protein) |
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| Protein accession | YP_001238921 |
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| Protein GI | 148254336 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.101845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0641084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGG TGCGTGACGT CACCACCGCC TATCAGGGGC TGGTTGCGAT CTCGAACGTT
TCGATCGACG TCGAGAAGGG CGAGATCGTC TGCGTCGCCG GCGCCAATGG CGCCGGCAAG
TCGACGCTGT TGAAGTCGAT CGCCGGTGCC GAGCGGCCGC GCGCCGGCAG CGTCACCTTC
GACGGCAACC GCATCGACGG CATGGCGCAG CATCTGATCA CCGCGAAGGG CATCGCCTAT
GTGCCGGAGA ACCGCCGGCT GTTTCCGCGG CTCTCGGTGC GCGACAACTT AAGGCTCGGC
AGCTATCTCT ACCGCAGCGA AGCGAATCGC GACGAGCCGC TCGACTTCGT CTTCAAGCTG
TTCCCGCGCT TGTCCGAGCG GCTGGAGCAG CGCGCCGAGA CCTTGTCGGG CGGCGAGCAG
CAGATGCTGG CGATCGGCCG CGCGCTGATG ACCCGGCCGC GGCTCCTGAT GCTCGACGAG
CCGTCGCAGG GCATCATGCC GAAGCTGGTC GACGAAATCT TCCAGGCGGT GAAGCGCATC
CGCGATGCCG GCATGACGGT CCTCATCGTC GAGCAGCGCA TGGCCGAGTG CCTCGAGATC
GCCGACCGTG CCTACATCCT GCAAACCGGC CGCGTGCTGA TGCAGGGCAC AGCGGCCGAG
ATCAGCGGCA ACAAGGACGT GCGGAAGGCG TATCTGGGGC TCTGA
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| Protein sequence | MLSVRDVTTA YQGLVAISNV SIDVEKGEIV CVAGANGAGK STLLKSIAGA ERPRAGSVTF
DGNRIDGMAQ HLITAKGIAY VPENRRLFPR LSVRDNLRLG SYLYRSEANR DEPLDFVFKL
FPRLSERLEQ RAETLSGGEQ QMLAIGRALM TRPRLLMLDE PSQGIMPKLV DEIFQAVKRI
RDAGMTVLIV EQRMAECLEI ADRAYILQTG RVLMQGTAAE ISGNKDVRKA YLGL
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