Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2885 |
Symbol | |
ID | 5152547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2992524 |
End bp | 2993357 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640557764 |
Product | putative ABC transporter permiase component |
Protein accession | YP_001238918 |
Protein GI | 148254333 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0257829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCCTGC TCTACGGCCT GATCGCCGTG GGGCTGGCGC TCATCTTCGG CCTGATGGAC GTCGTGAACT TCGCCCATGG CGAGTTTCTG ATGATCGCGA TGTACGCGAC CTTCTTCCTG TTCGCGTTCT TCGCACTCGA TCCATTGTTG TCGGCGCCCC TGGTCGCCGC CGCTTTGTTC ATCTTCGGAG CTGTGGTCTA TCTGCTGATC GTGAGATTTG CGGTCCGGGC CAAGGCCAAT ACCGGCATGG TGCAGATCTT CTCCACCTTC GGCCTCGCGG TGCTCATGCG TGGCGTCGCG CAGTATTTCT TCACGCCGGA CTATCGCAGC ATTCCGCACT CCTGGCTGGG CGGCAAGACG ATCTCGATCG CCGGAATCTA CCTGCCGCAG CCGCAGCTGG TCGGCGCGCT GATCGCGATC GCGGCTTTCG CCGGCCTGTA CTTCTTCATC CACCGCACCG ATTTCGGCCG GGCGCTGGAA GCAACCCGCG AGGACGCCGG CGCGGTGGCG CTGGTCGGCA TCGACAAGAA CAAGGTGTTC GCGCTCGGCT GGGGCCTCGG TGCGGCGTTA GTCGGCCTTG CCGGCGCGGT CATGGCGATC TTCTTCTATG TCTTCCCGGA CGTCGGCGCC TCGTTTGCGA CCATCGCCTA TGTCACGGTG GCGCTCGGCG GCTTCGGCAG CGTGTTCGGC GCCTTTGCCG GCGGCATCGT GGTCGGTCTT GTCGAGGCCA TCACCACCCT GATCCTGCCG CCATCGCTCA AGACGGTCGG CATCTATGGC GTCTATCTCC TCGTCGTCTT CATCCGCCCG CGCGGCCTGT TCGGATCGAT CTGA
|
Protein sequence | MGLLYGLIAV GLALIFGLMD VVNFAHGEFL MIAMYATFFL FAFFALDPLL SAPLVAAALF IFGAVVYLLI VRFAVRAKAN TGMVQIFSTF GLAVLMRGVA QYFFTPDYRS IPHSWLGGKT ISIAGIYLPQ PQLVGALIAI AAFAGLYFFI HRTDFGRALE ATREDAGAVA LVGIDKNKVF ALGWGLGAAL VGLAGAVMAI FFYVFPDVGA SFATIAYVTV ALGGFGSVFG AFAGGIVVGL VEAITTLILP PSLKTVGIYG VYLLVVFIRP RGLFGSI
|
| |