| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2881 |
|---|
| Symbol | |
|---|
| ID | 5152876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2987857 |
|---|
| End bp | 2989107 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640557760 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_001238914 |
|---|
| Protein GI | 148254329 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.138552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG CCGTCACCAA TCTGCAGATC GATTCCGCCC GCCTCTGGGA CAGTATCCAC
GAGACCGCCA AGTTCGGTGC CACGCCGAAG GGCGGCGTAC GCCGGCTGAC CCTGAGCCAG
GAGGACAGGC AGGTCCGCGA CTGGTTCCGC AAAGCCTGCG AGGACGCGGG GCTCGAGGTT
CACGTCGACA CGCTCGGCTC GATGTTCGGC TTACGCAAGG GACGCGACAT GTCGAAGCCG
CCGGTCGGGC TCGGCTCGCA TCTCGACACC CAGCCGACCG GCGGCAAGTT CGATGGCATC
CTGGGAACGC TCGGCGCGCT CGAGGTGATC CGCACGCTGA ACGATGCCGG CATCGAGACC
GACGCGCCGC TGTGCATCGT CAACTGGACC AATGAGGAAG GCTCGCGCTT CGCACCGGCG
ATGATGGCGT CCGCAGCCTA TGTCGGCGAC TTCACTGTCG AGGACATCCT GTCGCGCAAA
GATGCGGACG GCGTCACGGT CGGCGAGGCG CTGGACGGCA TCGGCTATCG CGGCGAGAGC
AAGGTCGGCA CGCAGAAATT CTCCGGCTTC GTCGAGCTGC ATATCGAGCA GGGCCCGATC
CTGGAGGCCG AGAACAAGAC CATCGGCGTG GTCGATCACG GCCAGGGCGT GTTCTGGTAT
GACGGCAAAG TCACCGGCTT CGAGAGCCAT GCCGGCTCGA CGCCGATGCC GCTGCGCCGC
GACGCGCTGC TGGCACTGTC CGAATTCGCG CTCACTTTGG AGCAGATCGC GCTCAAGCTC
GGGCCGAATG CGGTCGCCAC CATCGGCGAG GCCGTGATCG CCAATCCCTC GCGCAACGTC
ATCCCCGGCG AGATCGCCTT CACCATCGAC TGCCGCAGCG CCAATGCCGA CACGCTTGAA
GCGCTCGACG CCAGCCTGCG CGCGGCGGCG AGCGAAATTG CGAAGAAGCG GAAGGTCGAG
ATCGCGATCG ATCAGGTCTG GCGCAAGCCG CCGACGCATT TCGACCCCAA GCTGGTCGAC
GCCGTCGAGC GCGCCGCCGG CGCGCTCGGC TACGCGCACC GCCGCATCAC CTCGGGCGCC
GGCCACGACG CCTGCAATCT GAACACCATC ATGCCGGCGG CGATGGTGTT CGTCCCCTGC
AAGGACGGAA TCAGCCACAA CGAGCTGGAG GATGCGACCC AGTCCGACTG CGCCGCCGGC
GCCAACGTGC TGCTGCACAC AGTGCTGTCG CTGGCCGGCG TGGCGTCGTG A
|
|---|
| Protein sequence | MSRAVTNLQI DSARLWDSIH ETAKFGATPK GGVRRLTLSQ EDRQVRDWFR KACEDAGLEV
HVDTLGSMFG LRKGRDMSKP PVGLGSHLDT QPTGGKFDGI LGTLGALEVI RTLNDAGIET
DAPLCIVNWT NEEGSRFAPA MMASAAYVGD FTVEDILSRK DADGVTVGEA LDGIGYRGES
KVGTQKFSGF VELHIEQGPI LEAENKTIGV VDHGQGVFWY DGKVTGFESH AGSTPMPLRR
DALLALSEFA LTLEQIALKL GPNAVATIGE AVIANPSRNV IPGEIAFTID CRSANADTLE
ALDASLRAAA SEIAKKRKVE IAIDQVWRKP PTHFDPKLVD AVERAAGALG YAHRRITSGA
GHDACNLNTI MPAAMVFVPC KDGISHNELE DATQSDCAAG ANVLLHTVLS LAGVAS
|
|---|
| |