| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2879 |
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| Symbol | yeaU |
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| ID | 5152874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2985372 |
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| End bp | 2986460 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640557758 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001238912 |
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| Protein GI | 148254327 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.284838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0371966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CTGAGGATCC GCTCGATGAG CAAGAAGCCC TATCGCATCG CAGTCATCCC CGGCGACGGC
ATCGGCAAGG AGGTCATGCC CGAGGGGCTG CGCGTGATCG AGGCCGCGGC CAAGAAGCAT
GGCGTCGCCG TGCAGTTCGA TCATTTCGAC TTCTCGAGCT ACGATTATTA CGAGAAGCAC
GGCCAGATGA TGCCGGATGA CTGGAAGGCG CAGATCGGCA GCCATGACGC GATCTATTTC
GGTGCCGTCG GCTGGCCGGC CAAGATCGCC GACCATGTCT CGCTATGGGG CTCGCTGATC
AAGTTCCGCC GCGAGTTCGA CCAATACGTC AATTTGCGGC CTGTGCGGCT GATGCCCGGC
GTCCCGTCGC CGCTGGCGGG CCGCAAGCCG GGCGACATCG ATTTCTGGGT GGTGCGCGAG
AACACCGAAG GCGAGTATTC GTCCGTCGGC GGCCGCATGT TTCCGGACAC CGACCGCGAA
TTCGTCACCC AGCAGACGGT GATGACGCGC ACCGGCGTCG ATCGTATCCT GAAGTTCGCG
TTCGAGCTGG CGCAGTCCCG GCCGAAGAAG CACCTGACGT CGGCGACCAA GTCGAACGGC
ATCTCGATCA CGATGCCGTA TTGGGACGAG CGGGTCGAGG CGATGGCCAA GAACTATCCG
GGCGTGAAGT GGGACAAGTA CCACATCGAC ATCCTCACCG CGAATTTCGT GCTGCATCCG
GATTGGTTTG ATGTCGTGGT CGGGTCCAAC CTGTTCGGCG ACATCCTGTC CGATCTCGGC
CCCGCCTGCA CCGGTACTAT CGGCATCGCG CCCTCGGGCA ATATCAACCC CGAGCGCAAT
TTCCCGTCGG TGTTCGAGCC GGTGCACGGC TCCGCGCCCG ACATCGCCGG GCAGGGCATC
GCCAACCCGA TCGGCATGAT CTGGTCGGGC GCGATGATGC TGGAGCATCT GGGCGAGAAG
ACCGCGGCGC AGGCGATCGT CGGCGCGATC GAGCGCACCT TGGCCGAGCG GACGTTGCGC
ACGCGCGACC TCGGCGGCAA CGCGGATACC GAGGCGTGCG GCAAGGCGGT CGCGGAGATG
GTGGATTAG
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| Protein sequence | MRIRSMSKKP YRIAVIPGDG IGKEVMPEGL RVIEAAAKKH GVAVQFDHFD FSSYDYYEKH
GQMMPDDWKA QIGSHDAIYF GAVGWPAKIA DHVSLWGSLI KFRREFDQYV NLRPVRLMPG
VPSPLAGRKP GDIDFWVVRE NTEGEYSSVG GRMFPDTDRE FVTQQTVMTR TGVDRILKFA
FELAQSRPKK HLTSATKSNG ISITMPYWDE RVEAMAKNYP GVKWDKYHID ILTANFVLHP
DWFDVVVGSN LFGDILSDLG PACTGTIGIA PSGNINPERN FPSVFEPVHG SAPDIAGQGI
ANPIGMIWSG AMMLEHLGEK TAAQAIVGAI ERTLAERTLR TRDLGGNADT EACGKAVAEM
VD
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