| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2868 |
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| Symbol | paaD |
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| ID | 5152724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2973062 |
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| End bp | 2973565 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640557747 |
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| Product | phenylacetic acid degradation protein paaD |
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| Protein accession | YP_001238901 |
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| Protein GI | 148254316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme |
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| TIGRFAM ID | [TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.499759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.217404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAGTCA CGGACCTCAG CCCTGCCGAA CTGCGCCAGC GCGCCTGGGA GGCGGCTGCG
TCGGTGGCCG ATCCGGAAAT TCCGGTGCTG ACGATCGACG ATCTCGGCGT GCTGCGCGAG
GTCGAACTGG TCGGCGATCG CGTCGACGTC GCGATCACGC CAACCTATTC CGGCTGTCCG
GCGATGAACA TGATCGCCTT GGAAATCGAG CTCGCGCTGG AGCGCGCCGG TTTCCGTGAG
GCCAGGGTGC GGACCGTGCT GTCGCCGGCC TGGACCACGG ACTGGATGAG CGAAGAGGGA
CGCCGCAAGC TGCGCGACTA CGGCATTGCG CCGCCGCAGC CATCAAGCGG CCGGCGCGCG
CTGTTCGGCG TCGCCGAGGT GGCATGCCCG CAATGCGGCT CCGTCGACAC CGAGCAACTC
GCGGAGTTCG GCTCGACCTC CTGCAAGGCG CTGTGGCGTT GCAAATCGTG CCGCGAGCCG
TTTGATTATT TCAAATGTCA CTGA
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| Protein sequence | MVVTDLSPAE LRQRAWEAAA SVADPEIPVL TIDDLGVLRE VELVGDRVDV AITPTYSGCP
AMNMIALEIE LALERAGFRE ARVRTVLSPA WTTDWMSEEG RRKLRDYGIA PPQPSSGRRA
LFGVAEVACP QCGSVDTEQL AEFGSTSCKA LWRCKSCREP FDYFKCH
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