| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2866 |
|---|
| Symbol | paaB |
|---|
| ID | 5152449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2971870 |
|---|
| End bp | 2972157 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640557745 |
|---|
| Product | phenylacetate-CoA oxygenase subunit PaaB |
|---|
| Protein accession | YP_001238899 |
|---|
| Protein GI | 148254314 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
|---|
| TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0886205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.281971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGC CGAACACGCC GTTGTGGGAG GTCTTCATCC GCAGCCGCAA CGGGCTCGCG
CACAAGCATT GCGGTTCGCT GCATGCGCCT GATGCGACCA TGGCGCTGCA GGCCGCGCGC
GACCTCTACA CCCGTCGCGG CGAGGGCCTG TCGATCTGGG TGGTGCCGTC GAGTGCGATC
ACCGCGTCGG ACCCTGCTGA CAAGGCCATG ATGTTCGAGC CGGCGGAATC GAAGATCTAT
CGCCACCCGA CATTCTATGA AGTGCCCGAG GAAGTCGGGC ATATGTGA
|
|---|
| Protein sequence | MATPNTPLWE VFIRSRNGLA HKHCGSLHAP DATMALQAAR DLYTRRGEGL SIWVVPSSAI
TASDPADKAM MFEPAESKIY RHPTFYEVPE EVGHM
|
|---|
| |