| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2857 |
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| Symbol | |
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| ID | 5152060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2963691 |
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| End bp | 2965289 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640557737 |
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| Product | putative oligopeptide ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001238891 |
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| Protein GI | 148254306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.207734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGAC GCAAATCCCT GCTCATTGCG GCGGCCGCCA TCCTCGTTGG CCTCGCGGGG
CTGCCGGCCT CGGCCCAGAC CCTGCGCTAT GCCAACCAGG GCACCCTCAA ATCGCTCGAT
CCCTATACTT TCAAGGAATC GACCACGATC GCGCACCACG CCCACGTTTA TGAGGGTCTC
ACCGCCCGTG ACAAGGATCT CAAGATCATT CCTGCGCTGG CCGAGAGCTG GGAAACCCCC
GAGCCGACCC GCTGGCGTTT CCACCTGCGC AAGGGCGTCA AGTTCCACAA TGGCGAACCG
TTCACCGCCG ATGACGTGAT CTTCTCCGCC GACCGCGTTC GCGCCACCGG CTCGAACTTC
CTCTCCAACG TTCCGCCCGA CGCCAAGTTC GTCAAGATCG ACGACTACAC CGTCGACGTG
AAGCTCGATG CGCCCAATCC CATCCTGATC TCGCAATGGG ATACTTGGTA CATCATGAGC
AAGAAGTGGT GCGAGGAGAA CAACTCCGTC GCGCCGACCC CGGTGTCGGC AACGACACCG
AGCTACGCGG CACTGCACGA GAACGGCACC GGCCCCTTCA TCATCGAGAG CCATCAGCCC
GGTGTGAAGA CGGTGTTCAA GGTCAATCCG AACTGGTGGC GCAAGCCGGA GCACAACATC
AAGGAGATCG TGTTCACCAC CATCTCCTCG GACGCCACCC GCGTTGCGGC GCTGCTGTCC
GGCGAGGTCG ACATCATCGA GCCGGTGCCG GTGCAGGACA TCGGCCGCGT CGATTCGAGC
CCCAATGCCC AGGTCCTGAA GGGACCCGAG CTGCGCACGA TCTTCCTCGG CATGGACGAG
AGCCGCGACG AGCTGCTCTA TTCGAACGTC AAGGGCAAGA ACCCGTTCAA GGATATCCGT
GTCCGCGAGG CGTTCTACAA GGCCATTGAT GTCGAGCTGA TCAAGACCCG CGTGATGCGC
GGCCTGTCGA CGCCGTCGGC GCTGATGATT GCACCTGAAC TGTTCCCGCT GTCCAAGGAG
TTCACCAGGC CGAAATACGA TCCGGACGGC GCCAAGAAAC TGCTGACAGA GGCCGGCTAT
CCCGACGGCT TCGAAGTCGC TCTGGACTGC CCGAACGACC GCTACGTGAA CGACGCCGCC
ATCTGCCAGG CGGTGGTCGG CATGCTCGCC CGGATCGGGG TCAAGGTGAA CCTCAACGCG
CAACCGAAGG CGCAGTATTT CGCCAAGGTG CTGAAGCCGG GCGGCTACAA CACCTCGTTC
TTCCTGCTCG GCTGGACCCC GTCGTCGATG GACGCCCACA ATGTGATGCA CGACATCATG
GGCTGCCGCG AGGATCCCAA GGACCCAACC CGCGGCGAGG CCAATCTCGG CAATTACTGC
AACAAGGAGT TCGACGCCCT GACCGACAAG GTCCTGGTCG AGACCGACGC CGCCAAGCGC
AATCAGCTGA TCAAGCAGGC GTTCGAGATC GGCATCAAGG ACTACGGCTA TATCCCGGTG
CACCAGCAGG CCGTGGCCTG GGGCGTGTCC AAGAAGGTCA AGATTGCGCT GCGCGCCGAC
AACCTCGTGC TGATGTACTT GGCCACCAAG ACCGAGTAG
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| Protein sequence | MSGRKSLLIA AAAILVGLAG LPASAQTLRY ANQGTLKSLD PYTFKESTTI AHHAHVYEGL
TARDKDLKII PALAESWETP EPTRWRFHLR KGVKFHNGEP FTADDVIFSA DRVRATGSNF
LSNVPPDAKF VKIDDYTVDV KLDAPNPILI SQWDTWYIMS KKWCEENNSV APTPVSATTP
SYAALHENGT GPFIIESHQP GVKTVFKVNP NWWRKPEHNI KEIVFTTISS DATRVAALLS
GEVDIIEPVP VQDIGRVDSS PNAQVLKGPE LRTIFLGMDE SRDELLYSNV KGKNPFKDIR
VREAFYKAID VELIKTRVMR GLSTPSALMI APELFPLSKE FTRPKYDPDG AKKLLTEAGY
PDGFEVALDC PNDRYVNDAA ICQAVVGMLA RIGVKVNLNA QPKAQYFAKV LKPGGYNTSF
FLLGWTPSSM DAHNVMHDIM GCREDPKDPT RGEANLGNYC NKEFDALTDK VLVETDAAKR
NQLIKQAFEI GIKDYGYIPV HQQAVAWGVS KKVKIALRAD NLVLMYLATK TE
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