Gene BBta_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2854 
Symbol 
ID5152057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2960619 
End bp2961602 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content68% 
IMG OID640557734 
Productputative oligopeptide ABC transporter ATP-binding protein 
Protein accessionYP_001238888 
Protein GI148254303 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.609157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.248149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCGTTCTGTC CGTGCGCAAT CTGCAGGTCG AGTTCGAAAC AAGGCGCGGC 
ATGCTGCGCG CGATCGACAG CGTCTCCTAC GACATCGCCA AAGGCGAGGT GCTCGGCGTG
GTCGGCGAAT CCGGCGCCGG CAAATCCGTC ACCGGCCTCG CCGTGATCGG CCTGATCGAT
CCGCCCGGCC GCATCTCGGG CGGCGAGATC CTGCTGTCCG GCCTGCGGAT CGACAACCTC
CCGCCGGAGG AGATGCGCAA GGTGCGCGGC AAGCGGATCG GCATGATCTT CCAGGATCCG
CTGACCTCGC TCAATCCGCT GTATCGCGTC GGCGACCAGA TCATCGAGAC CATCAAGACC
CACACCAACC TCACCGACCA GCAGGCGCGC AAGCGCGCCA TCGACCTGCT CGCCGAGGTC
GGAATCCCCG CCCCTGAGAA GCGCATCGAC GGCTATCCGC ACGAATTCTC CGGCGGCATG
CGCCAGCGCG TCGTGATCGC GCTCGCGCTG TGCGCCGAGC CGGAGCTGAT CATCGCCGAC
GAGCCGACCA CCGCGCTCGA CGTCTCCGTG CAGGCGCAGA TCATTTCGCT GATCAAGCGG
CTCGGCCGCG ACCACGGCAC CGCCGTGATG CTGGTGACCC ACGACATGGG CGTGATCGCC
GAGACCTGCG ACCGCGTCGC CGTGATGTAT GCCGGTCGCG TCGCCGAGAT CGGCCCGGTG
CAGGAGGTCA TCAAAAACCC GCTGCACCCC TACGCCAAGG GCCTGATGGG TGCGATCCCG
ACGCTCGCGG GTGAGGACAA GCGCTTGGTG CAGATCCCGG GCGCGATGCC GCGGCTGTCC
GCGATCCCGC CCGGCTGCTC GTTCAATCCG CGCTGCAGCT CCGCCTTCGA CCGCTGCCGC
GTCGACCGGC CGGAGCCGCT GCGCCAGGGC ACGCAGGCAG TCGCCTGCCA TCTGTATGAT
CGCGCGACGG AGACCGCGGC ATGA
 
Protein sequence
MTAPVLSVRN LQVEFETRRG MLRAIDSVSY DIAKGEVLGV VGESGAGKSV TGLAVIGLID 
PPGRISGGEI LLSGLRIDNL PPEEMRKVRG KRIGMIFQDP LTSLNPLYRV GDQIIETIKT
HTNLTDQQAR KRAIDLLAEV GIPAPEKRID GYPHEFSGGM RQRVVIALAL CAEPELIIAD
EPTTALDVSV QAQIISLIKR LGRDHGTAVM LVTHDMGVIA ETCDRVAVMY AGRVAEIGPV
QEVIKNPLHP YAKGLMGAIP TLAGEDKRLV QIPGAMPRLS AIPPGCSFNP RCSSAFDRCR
VDRPEPLRQG TQAVACHLYD RATETAA