| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2852 |
|---|
| Symbol | |
|---|
| ID | 5151880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2957678 |
|---|
| End bp | 2959480 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640557732 |
|---|
| Product | putative gamma-glutamyltranspeptidase |
|---|
| Protein accession | YP_001238886 |
|---|
| Protein GI | 148254301 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.3405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCA TCAATCCCGA TCCCTTCACG ACCCGCCCCG AGATCGACGG CACCTTCGGC
GTCGTCACCT CCACGCATTG GCTCGCCACT GCGGTGGGCA TGGCGATGCT GGAGCGCGGC
GGCAATGCCT TCGACGCCGG CGTTGCTGCG GCCTTCACCC TGCAGGTCGT CGAGCCGCAT
CTCAACGGAC CCGGCGGCGA CGTGCCGATC ATCCTGCACG ACGTGAAGCG CGGACGCACC
GAGGTGATCT GCGGTCAGGG CCCGGCGCCA GCAGGCGCCA CCATCGCGCA CTACAAGCGC
GAAGGCCTCG ACATGGTGCC CGGCACCGGG CTGCTGGCGG CCTGCGTGCC CGGCACCTTC
GAGTCCTGGA TGCTGCTGTT GCGCGACTAC GGCACGATGC GGCTGCGCGA CGTGCTGGAG
CCGGCGATTG GTTACGCGCG CGACGGCTAT CCGCTGGTCG AGCGCGTCTC GGCGACCATC
CAGACCGTCG AGCAGCTGTT CAAGACACAT TGGCCGACTT CAGCAGCGCT CTATCTGCCC
CATGGCGAGG TACCGAAGCC AGGCACGCTG TTCACCAATC CGCAGCTCGC CGAGACCTAT
GCGCGCATCC TCAGCGAAGG CGAGAGCGCG GGCGGCGACC GCGACGCGCA GATCGAGCGG
GCGCGCAAGG CGTGGTCGCA GGGCTTCGTC GCCGAGGCGA TCGACCGCTT CTGCCGGACG
CAGGAGGTCA TGGACGTCTC GGGCACGCGC CATAAGGGCG TGCTGACCGC CGACGACATG
GCGCGCTGGC AGCCGAGCAT CGAGGCGCCA CTGACCTATG AGTACGGCCG CTACACCGTT
TGCAAGGCCG GCGTCTGGAG CCAGGGCCCG GTGCTGCTGC AGCAGCTCGC GCTGCTCAAG
GGCTTCGCGC TCGACGGTCT CGACCCGACC GGTCCCGATT TCATCCATTG GCAGATCGAA
GCCGCCAAGC TGGCGTTCGC CGATCGCGAG GCGTTCTACG GCGATCCGAA CTTCGCCGAC
ATCCCGATCC AGACGCTGCT GTCGGATGCG TACAATGACG AGCGGCGCAA GCTGATCACC
GAGAAGGCGT CGCTGGAGCT GCGCCCTGGC AAGCTCGACG GCTACGGCGC CAAGGTGCAG
TTGCGCGAGG CGCAGGGCCA TCGCGAGGCC GTCGGTGCAA TGGGCTCGGG CGAACCCACC
GTGGGCCGCT TCGGCGAGGT GCGCGGCGAC ACCGTGCATT TCGACATTAT CGACCGCGAC
GGCAACATGA TCTCAGCGAC CCCGTCCGGC GGCTGGCTGC AATCCTCGCC CGTGATCCCC
GAGCTCGGTT TCTGCCTCGG CACGCGCGCG CAGATGTTCT GGCTCGAGGA GGATCATCCG
GCCGCGCTGG TTCCGGGCAA GCGGCCGCGC ACCACGCTGT CGCCGACCAT GGCGCTGCGC
GATGGCGAGC CCTACGTCGC CTGGGGCTCG CCCGGCGGCG ACCAGCAGGA CCAGTGGAAC
ACGCAGTTCT TCCTGCGCCA CGTTCATGCC GGCATGAACC TGCAGGAAGC GATCGACGCG
CCGGCCTGGC ACTCCGAGCA TTTCCCGATC TCGTTCTGGC CACGCACCGC GCGGCCCGGC
GTGCTCGTGG TCGAGAACCG CGTCCCCAAG ACGACCGTCG AGGAGCTGCG CCGCCGCGGC
CATGTCGTCG AGGTAGGGCC CGACTGGTCG GAGGGCCGCC TCACCGCGGC CTCGCGTGTC
AGCCGACGCC GTCGCGCCGC CGCCAATCCG CGTGGCATGC AGGGCTACGC CGCCGGACGA
TGA
|
|---|
| Protein sequence | MSFINPDPFT TRPEIDGTFG VVTSTHWLAT AVGMAMLERG GNAFDAGVAA AFTLQVVEPH
LNGPGGDVPI ILHDVKRGRT EVICGQGPAP AGATIAHYKR EGLDMVPGTG LLAACVPGTF
ESWMLLLRDY GTMRLRDVLE PAIGYARDGY PLVERVSATI QTVEQLFKTH WPTSAALYLP
HGEVPKPGTL FTNPQLAETY ARILSEGESA GGDRDAQIER ARKAWSQGFV AEAIDRFCRT
QEVMDVSGTR HKGVLTADDM ARWQPSIEAP LTYEYGRYTV CKAGVWSQGP VLLQQLALLK
GFALDGLDPT GPDFIHWQIE AAKLAFADRE AFYGDPNFAD IPIQTLLSDA YNDERRKLIT
EKASLELRPG KLDGYGAKVQ LREAQGHREA VGAMGSGEPT VGRFGEVRGD TVHFDIIDRD
GNMISATPSG GWLQSSPVIP ELGFCLGTRA QMFWLEEDHP AALVPGKRPR TTLSPTMALR
DGEPYVAWGS PGGDQQDQWN TQFFLRHVHA GMNLQEAIDA PAWHSEHFPI SFWPRTARPG
VLVVENRVPK TTVEELRRRG HVVEVGPDWS EGRLTAASRV SRRRRAAANP RGMQGYAAGR
|
|---|
| |