| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2847 |
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| Symbol | |
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| ID | 5150622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2950064 |
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| End bp | 2953162 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557727 |
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| Product | RND family multidrug efflux protein |
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| Protein accession | YP_001238881 |
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| Protein GI | 148254296 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCA CCGATATCTT CATCAAGCGG CCAGTGCTGT CGCTCGTGGT CAGCATGCTC
ATCCTGCTGC TCGGCCTGCG TGCCGCGTTC GAGCTGCCGA TCCGGCAATA TCCGAAGCTG
TCGAACACGG TCGTGAACGT CACGACCGTC TATCCCGGCG CCTCCGCCGA TCTGATCCAG
GGCTTCATCA CGACGCCGCT GGAGCAGGCG GTCGCGTCGG CCGAAGGCGT CGACTACATC
ACCTCGTCCT CGGTGCAGGG CACCAGCACG ATCCAGGTCT TCATCAAGCT CAATTTCGAT
CCGAACCAGG CGCTCACCGA GGTGCTCGCC AAGGTGAACT CGGTCCGCTA TCTGATCCCC
AGGGAATCCA ACGACCCGAT CGTCACCAAG AGCACGGGGC AGACGACGTC GGTGATGTAT
CTCGGCTTCT CCAGCGAGGA GCTGTCGGGC TCGGCGATCT CGGACTATCT GACGCGCGTG
GTGCAGCCGG TGCTGTCGAC CGTCGACGGC GTCGCCGCGG CCAACATTCT CGGCGGCCAG
ACCTTCGCGA TGCGGATCTG GCTCAACCCG GAAAAGATGG CCGGCCGTAA CGTGTCGCCG
GCCGATGTCG CCGCCGCGAT CTCCGCCAAC AACTTCCAAT CCGCCGCCGG ACAGGCGAAG
GGCTACTTCA TCGTCTCCAA CGTCACGACC AATACCGGCC TGACCGACGT CAACCAGTTC
AAGCGGATGA TCGTCAAGGC CAAGGACGGC GGCTTCGTCC GCATGGAGGA CATCGCCACC
GTCGAGCTCG CGGCGCAGAG CACCGATGCC AGCGTCGCCT TCAACGGCGA GCGCGCCATC
TTCATCGGCG TCGACGCGAC GCCGCAGGGC AACCCGCTCA ACATCGTCAA GGGCGTGCGT
GCGCTGTTCC CCGATCTCGA GCGCAACCTG CCGCCGTCGA TGAAGATGAA GGTGGCCTAC
GATTCCACCA AGTTCATCCA GTCGTCGATC GACGAGGTCG AGCACACGCT CGGCGAGGCC
GTGCTCATCG TCATCGTCGT GATCTTCCTG TTCCTGGCCT CGCTGCGCTC GGTCATCATT
CCCGTGGTGA CGATCCCGCT GTCCTTGATC GGCGTCTGCA CGATGATGCT GGCGCTCGGC
TTCAGCATCA ATCTGCTGAC CTTGCTGGCC ATGGTGCTGG CGATCGGTCT CGTGGTCGAC
GACGCCATCG TGGTGGTCGA GAACATCCAC CGCCATCTGG AGGAGGGCAG GGCGCCCGTC
CAGGCGGCGC TGCAGGGCGC GCGCGAGATC GTCGGCCCGG TCATCTCGAT GACGATCACC
TTGGCCGCAG TGTACGCGCC GATCGGCTTT CTCGGCGGCC TCACCGGCTC GCTGTTCCGC
GAATTCGCCT TCACGCTCGC GGGCTCCGTC ATCGTGTCGG GCGTCATCGC GCTGACCCTG
TCGCCGATGA TGTGCTCGGT GCTGCTGCGC AGCGCCGAGG AGGGCCGCTT CGCGCGGATC
GTCAACCGCG TGTTCGGCGC GATGACCCGC TGGTACGGCC GGCAGCTCGA CCGTTCGCTC
GACTACCGGC CGGTGACGGC GCTGTTCGCG GTCACGATCC TCGGTCTCGT CGGCTTCCTC
TATATGCACA CGTCCAAGGA GCTGGCGCCG GAGGAGGATC AGGGCATCGT GTTCTCGATC
ACCAAGGCGC CGAAATACGC CAATATCGAC TACATCAACT TCTACACCGA CAAGCTCGAC
AAGGTGTTCC AGAAGTTCCC CGAGACCGAT TTGCGCTTTG TGCTGAACGG CATCAACGGC
CCGCAGGGCG GCTTCGCCGG CATGCTGCTG AAGCCGTGGG ACGAGCGCAC GCGCTCCTCG
ATCAAGCTGA AACCGCTGGT GCAGGCGGAG CTGTCCAAGA TCGAGGGCAT CAACGCCTTC
GCCTTCAACC TGCCGGCGCT GCCGGGCGGC CCGGGCGGCC TGCCGGTGCA GATGGTGATC
AGCTCGACCA GCGGCTTCCA GGCGGTCTAT GAGCAGATGG CCAAGCTGAA GGACGCCGCG
CGCAAGAGCG GCATCTTCAT CGTCTCCGAC AGCGATCTCG AATTCAACCA GCCCGTCGTC
AAGGTCTGGA TCAACCGCAG CAAGGCCTCC GATCTCGGCA TCACCATGCA GTCGATCGGC
AACACGCTGG CGGTGCTGCT CGGCGGCAAC TACATCAACC GCTTCAATCT CGAAGGCCGC
TCCTACCAGG TGATCCCGCA GGTGCCGCGC GACAAGCGGC TGTCGCCGGA CTCGCTGTCG
GGTTATTATG TGGCGACCGC CGCGGGCCAG CAGGTGCCGC TGTCGACGGT GGTCACCATC
GAGACCGCGA CCGATCCGAA CTCGCTGACG CATTTCAACC AGCTCAACTC GGCGACCTTC
TCGGCCGTGC CGATGCCGGG CGTCACCGTC GGCCAGGCGG TCGACTTCCT GGAGAAGCAG
GCCAAGAACC TGCCGTCGGG CTTCAGCCAC GATTACCTCG CCGACGCCCG TCAATACGTC
CAGGAAGGCA ATCAGCTCGC GATCACCTTC GGCTTCGCAT TGATCATCAT CTTCCTGGTG
CTGGCGGCGC AGTTCGAGAG CCTGCGCGAT CCGCTGGTGA TCATGATCAG CGTGCCCATG
GCGATCGTCG GCGCGCTGAT CCCGCTGTTC TTCGGACTTG CGACGATGAA CATCTACACC
CAGGTCGGTC TGCTGACGCT GGTCGGACTG ATCACCAAGC ACGGCATCCT GATGGTGGAG
TTCGCCAATG AGCTGCAGCT CAAGGAAGGC GTGGACCGCC GGACCGCGAT CGAAACCTCC
GCGCGCATCC GCCTGCGGCC GATCCTGATG ACCACGGCGG CGATGGTCAC CGGCCTGATC
CCGCTGCTGA CGGCGTCCGG CGCCGGCGCG GCCAGCCGGT TCTCGATCGG CCTCGTCGTC
GTCGCCGGCA TGTCGATTGG CACGCTGTTC ACGCTGTTCG TGCTGCCGGC CGTCTACACC
GTCATCGCCA CCGATCACCA GGCCGCCGCC AAGTCGAAGC GCGCCCGCGA GATCGCCCAG
TTCGACGCCG AGCCGGAGCA TGCGCTGAAG GCGAGCTGA
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| Protein sequence | MRFTDIFIKR PVLSLVVSML ILLLGLRAAF ELPIRQYPKL SNTVVNVTTV YPGASADLIQ
GFITTPLEQA VASAEGVDYI TSSSVQGTST IQVFIKLNFD PNQALTEVLA KVNSVRYLIP
RESNDPIVTK STGQTTSVMY LGFSSEELSG SAISDYLTRV VQPVLSTVDG VAAANILGGQ
TFAMRIWLNP EKMAGRNVSP ADVAAAISAN NFQSAAGQAK GYFIVSNVTT NTGLTDVNQF
KRMIVKAKDG GFVRMEDIAT VELAAQSTDA SVAFNGERAI FIGVDATPQG NPLNIVKGVR
ALFPDLERNL PPSMKMKVAY DSTKFIQSSI DEVEHTLGEA VLIVIVVIFL FLASLRSVII
PVVTIPLSLI GVCTMMLALG FSINLLTLLA MVLAIGLVVD DAIVVVENIH RHLEEGRAPV
QAALQGAREI VGPVISMTIT LAAVYAPIGF LGGLTGSLFR EFAFTLAGSV IVSGVIALTL
SPMMCSVLLR SAEEGRFARI VNRVFGAMTR WYGRQLDRSL DYRPVTALFA VTILGLVGFL
YMHTSKELAP EEDQGIVFSI TKAPKYANID YINFYTDKLD KVFQKFPETD LRFVLNGING
PQGGFAGMLL KPWDERTRSS IKLKPLVQAE LSKIEGINAF AFNLPALPGG PGGLPVQMVI
SSTSGFQAVY EQMAKLKDAA RKSGIFIVSD SDLEFNQPVV KVWINRSKAS DLGITMQSIG
NTLAVLLGGN YINRFNLEGR SYQVIPQVPR DKRLSPDSLS GYYVATAAGQ QVPLSTVVTI
ETATDPNSLT HFNQLNSATF SAVPMPGVTV GQAVDFLEKQ AKNLPSGFSH DYLADARQYV
QEGNQLAITF GFALIIIFLV LAAQFESLRD PLVIMISVPM AIVGALIPLF FGLATMNIYT
QVGLLTLVGL ITKHGILMVE FANELQLKEG VDRRTAIETS ARIRLRPILM TTAAMVTGLI
PLLTASGAGA ASRFSIGLVV VAGMSIGTLF TLFVLPAVYT VIATDHQAAA KSKRAREIAQ
FDAEPEHALK AS
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